Os05g0395300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF21 domain containing protein.
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Os05g0395300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF21 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.29 | 0.263 | 9.95 | -0.27 | 0.589 | -0.209 | -0.0937 | -1.32 | -0.257 | 4.43 | 1001 | 4516 | -- | -- |
| 32.27 | 0.265 | 9.96 | -0.306 | 0.592 | -0.356 | -0.00169 | -- | -0.235 | 4.34 | 999.2 | 11469 | -- | -- |
| 31.31 | 0.261 | 9.95 | -0.269 | 0.589 | -0.208 | -- | -1.32 | -0.257 | 4.43 | 1001 | 4520 | -- | -- |
| 32.12 | 0.264 | 9.96 | -0.345 | 0.6 | -0.408 | -- | -- | -0.246 | 4.4 | 999.6 | 11470 | -- | -- |
| 49.85 | 0.329 | 9.96 | -0.255 | -- | -0.244 | -- | -1.42 | -0.243 | -- | 1001 | 4290 | -- | -- |
| 35.87 | 0.281 | 9.97 | -0.262 | 0.589 | -- | -0.0897 | -- | -0.283 | 4.42 | -- | -- | -- | -- |
| 35.89 | 0.281 | 9.97 | -0.261 | 0.588 | -- | -- | -- | -0.283 | 4.42 | -- | -- | -- | -- |
| 51.05 | 0.333 | 9.97 | -0.315 | -- | -0.39 | -- | -- | -0.232 | -- | 999.7 | 11295 | -- | -- |
| 35.07 | 0.276 | 9.96 | -- | 0.59 | -0.342 | -- | -- | -0.219 | 4.43 | 999.6 | 10870 | -- | -- |
| 54.46 | 0.345 | 9.98 | -0.238 | -- | -- | -- | -- | -0.267 | -- | -- | -- | -- | -- |
| 37.69 | 0.287 | 9.97 | -- | 0.584 | -- | -- | -- | -0.254 | 4.43 | -- | -- | -- | -- |
| 53.53 | 0.341 | 9.96 | -- | -- | -0.329 | -- | -- | -0.201 | -- | 1000 | 11167 | -- | -- |
| 55.95 | 0.349 | 9.97 | -- | -- | -- | -- | -- | -0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 30.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 10 |
| 4 | 30.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 30.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 30.97 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 7 | 30.97 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 11 | 30.99 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 23 | 31.07 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 36 | 31.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 41 | 31.22 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 52 | 31.24 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 67 | 31.25 | temperature | 25.0 | 720 | > th | dose independent | rect. | 15 | 18 |
| 69 | 31.26 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 70 | 31.26 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 90 | 31.28 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 91 | 31.28 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 111 | 31.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 20 |
| 112 | 31.28 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 22 |
| 138 | 31.29 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 139 | 31.30 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 2 | NA |
| 166 | 31.30 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 5 | 7 |
| 169 | 31.31 | atmosphere | 1000.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 196 | 31.32 | atmosphere | 1000.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 198 | 31.32 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 200 | 31.32 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 226 | 31.32 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 238 | 31.33 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 265 | 31.33 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 14 | 20 |
| 270 | 31.33 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 284 | 31.34 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 8 |
| 342 | 31.35 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 358 | 31.35 | atmosphere | 1000.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 480 | 31.38 | atmosphere | 1000.0 | 4320 | > th | dose independent | no | NA | NA |
| 485 | 31.38 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 541 | 31.38 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 594 | 31.40 | atmosphere | 1000.0 | 4320 | < th | dose independent | no | NA | NA |
| 635 | 31.40 | atmosphere | 1000.0 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 716 | 31.42 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 807 | 31.43 | atmosphere | 1000.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 820 | 31.44 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 915 | 31.46 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |