Os05g0390000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipase, class 3 family protein.
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Os05g0390000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipase, class 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.62 | 0.501 | 8.02 | 1.21 | 1.13 | -0.831 | -0.281 | 0.995 | 0.0861 | 5.97 | 22.3 | 1148 | -- | -- |
| 116.16 | 0.502 | 8.05 | 0.971 | 1.13 | -0.856 | -0.296 | -- | -0.00369 | 5.98 | 21.7 | 1156 | -- | -- |
| 113.82 | 0.497 | 8.02 | 1.21 | 1.13 | -0.832 | -- | 1 | 0.0888 | 5.98 | 22.29 | 1153 | -- | -- |
| 116.25 | 0.502 | 8.06 | 0.955 | 1.12 | -0.899 | -- | -- | 0.00212 | 6.04 | 21.7 | 1156 | -- | -- |
| 169.5 | 0.606 | 8.03 | 1.36 | -- | -0.821 | -- | 1.34 | 0.136 | -- | 22.43 | 592 | -- | -- |
| 144.13 | 0.563 | 8.12 | 0.591 | 1.12 | -- | -0.285 | -- | -0.275 | 6.35 | -- | -- | -- | -- |
| 144.33 | 0.563 | 8.12 | 0.587 | 1.12 | -- | -- | -- | -0.274 | 6.35 | -- | -- | -- | -- |
| 172.57 | 0.612 | 8.07 | 0.907 | -- | -0.888 | -- | -- | 0.0352 | -- | 22.01 | 652 | -- | -- |
| 135.17 | 0.541 | 8.09 | -- | 1.14 | -0.641 | -- | -- | -0.143 | 6.03 | 22.4 | 1147 | -- | -- |
| 209.27 | 0.676 | 8.14 | 0.617 | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
| 153.42 | 0.579 | 8.13 | -- | 1.13 | -- | -- | -- | -0.34 | 6.32 | -- | -- | -- | -- |
| 169.55 | 0.606 | 8.1 | -- | -- | -0.849 | -- | -- | 0.00489 | -- | 25.3 | 353 | -- | -- |
| 219.31 | 0.691 | 8.15 | -- | -- | -- | -- | -- | -0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 4 | 112.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 17 | 113.64 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 18 | 113.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 42 | 114.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 51 | 114.65 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 73 | 115.04 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 12 |
| 78 | 115.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 80 | 115.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 156 | 115.74 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 163 | 115.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 172 | 115.90 | temperature | 25 | 720 | < th | dose dependent | sin | 4 | NA |
| 196 | 116.02 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 200 | 116.05 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 204 | 116.07 | temperature | 20 | 720 | > th | dose independent | sin | 6 | NA |
| 211 | 116.09 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 223 | 116.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 225 | 116.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 248 | 116.31 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 251 | 116.32 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 10 |
| 261 | 116.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 306 | 116.59 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 307 | 116.59 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 327 | 116.67 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 341 | 116.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 368 | 116.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 388 | 116.92 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 404 | 116.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 407 | 117.00 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 410 | 117.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 439 | 117.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 485 | 117.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 491 | 117.34 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 494 | 117.35 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 510 | 117.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 536 | 117.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 539 | 117.59 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 553 | 117.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 561 | 117.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 593 | 117.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 606 | 117.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 617 | 117.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 627 | 117.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 705 | 118.00 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 722 | 118.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 773 | 118.18 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 801 | 118.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 832 | 118.33 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 17 |
| 916 | 118.48 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 18 |
| 920 | 118.49 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |