Os05g0387300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0387300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.38 | 0.589 | 3.63 | -0.00978 | 1.02 | -1.47 | -3.63 | 6.23 | -0.196 | 23.1 | 25.4 | 922 | -- | -- |
| 171.75 | 0.61 | 3.69 | -0.555 | 0.788 | -0.878 | -3.09 | -- | -0.107 | 23.4 | 18.4 | 30954 | -- | -- |
| 206.63 | 0.669 | 3.72 | -0.684 | 1.01 | -1.13 | -- | 1.74 | -0.381 | 23.7 | 25.45 | 947 | -- | -- |
| 207.23 | 0.67 | 3.76 | -1 | 1.02 | -0.966 | -- | -- | -0.413 | 23.8 | 24.79 | 938 | -- | -- |
| 241.93 | 0.728 | 3.66 | -0.518 | -- | -1.09 | -- | 4.34 | -0.241 | -- | 23.7 | 1679 | -- | -- |
| 185.98 | 0.639 | 3.78 | -1.39 | 0.752 | -- | -3.27 | -- | -0.535 | 23.5 | -- | -- | -- | -- |
| 230.87 | 0.712 | 3.77 | -1.26 | 0.779 | -- | -- | -- | -0.525 | 0.306 | -- | -- | -- | -- |
| 251.08 | 0.741 | 3.73 | -1.09 | -- | -0.845 | -- | -- | -0.397 | -- | 23.01 | 1714 | -- | -- |
| 216.99 | 0.686 | 3.66 | -- | 0.807 | -1.17 | -- | -- | -0.0169 | 0.342 | 14.5 | 47520 | -- | -- |
| 269.01 | 0.766 | 3.75 | -1.24 | -- | -- | -- | -- | -0.513 | -- | -- | -- | -- | -- |
| 272.88 | 0.773 | 3.74 | -- | 0.761 | -- | -- | -- | -0.385 | 0.219 | -- | -- | -- | -- |
| 257.8 | 0.748 | 3.64 | -- | -- | -1.13 | -- | -- | -0.0239 | -- | 14.2 | 47520 | -- | -- |
| 309.35 | 0.821 | 3.72 | -- | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.75 | temperature | 25.0 | 10 | < th | dose independent | rect. | 17 | 11 |
| 6 | 154.78 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 4 |
| 13 | 155.94 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 14 | 156.15 | radiation | 1.0 | 720 | > th | dose independent | sin | 17 | NA |
| 18 | 156.47 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 18 |
| 19 | 156.58 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 20 | 156.61 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 34 | 156.83 | temperature | 25.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 38 | 156.94 | temperature | 25.0 | 90 | > th | dose independent | rect. | 14 | 11 |
| 39 | 156.94 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 52 | 157.18 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 18 |
| 62 | 157.29 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 68 | 157.35 | temperature | 25.0 | 90 | > th | dose independent | sin | 15 | NA |
| 76 | 157.40 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 78 | 157.48 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 87 | 157.60 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 6 |
| 100 | 157.68 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 105 | 157.86 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 146 | 158.20 | temperature | 25.0 | 30 | < th | dose independent | sin | 14 | NA |
| 200 | 158.91 | temperature | 25.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 280 | 159.84 | radiation | 1.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 297 | 159.99 | temperature | 25.0 | 720 | > th | dose independent | sin | 20 | NA |
| 302 | 160.04 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 331 | 160.12 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 347 | 160.16 | radiation | 1.0 | 720 | < th | dose independent | sin | 18 | NA |
| 349 | 160.17 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 354 | 160.20 | temperature | 25.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 386 | 160.55 | temperature | 25.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 482 | 161.16 | temperature | 25.0 | 30 | < th | dose independent | rect. | 14 | 14 |
| 484 | 161.17 | temperature | 25.0 | 720 | < th | dose independent | sin | 19 | NA |
| 526 | 161.31 | temperature | 25.0 | 720 | > th | dose independent | rect. | 13 | 7 |
| 585 | 161.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 606 | 161.82 | temperature | 25.0 | 10 | > th | dose independent | rect. | 17 | 11 |
| 624 | 161.97 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 2 |
| 688 | 162.23 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 2 |
| 699 | 162.28 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 2 |
| 781 | 162.68 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 831 | 162.95 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 832 | 162.96 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 834 | 162.98 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 850 | 163.06 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 857 | 163.09 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 887 | 163.20 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 16 |
| 911 | 163.26 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 927 | 163.30 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 948 | 163.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 11 |
| 954 | 163.44 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 970 | 163.52 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 17 |
| 994 | 163.63 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 23 |