Os05g0384700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0384700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.96 | 0.446 | 6.59 | 0.993 | 1.31 | -1.25 | 0.0858 | 0.393 | 0.274 | 16.8 | 20.7 | 9 | -- | -- |
| 90.13 | 0.442 | 6.59 | 0.943 | 1.31 | -1.24 | 0.118 | -- | 0.27 | 16.8 | 20.4 | 9 | -- | -- |
| 89.98 | 0.442 | 6.59 | 1 | 1.31 | -1.25 | -- | 0.447 | 0.276 | 16.8 | 20.7 | 8 | -- | -- |
| 90.17 | 0.442 | 6.6 | 0.933 | 1.31 | -1.24 | -- | -- | 0.255 | 16.8 | 20.4 | 8 | -- | -- |
| 159.08 | 0.587 | 6.61 | 0.75 | -- | -0.411 | -- | 0.221 | 0.0878 | -- | 15.3 | 2 | -- | -- |
| 112.73 | 0.498 | 6.64 | 0.67 | 0.972 | -- | -0.147 | -- | 0.0458 | 17.9 | -- | -- | -- | -- |
| 112.78 | 0.497 | 6.64 | 0.671 | 0.971 | -- | -- | -- | 0.0452 | 17.9 | -- | -- | -- | -- |
| 159.13 | 0.588 | 6.61 | 0.717 | -- | -0.404 | -- | -- | 0.0793 | -- | 15.3 | 3 | -- | -- |
| 111.09 | 0.491 | 6.63 | -- | 1.19 | -0.885 | -- | -- | 0.0992 | 17.1 | 20.7 | 6 | -- | -- |
| 161.69 | 0.594 | 6.63 | 0.641 | -- | -- | -- | -- | 0.0227 | -- | -- | -- | -- | -- |
| 124.63 | 0.522 | 6.66 | -- | 0.961 | -- | -- | -- | -0.0295 | 17.9 | -- | -- | -- | -- |
| 171.69 | 0.61 | 6.65 | -- | -- | -0.462 | -- | -- | -0.0561 | -- | 32.7 | 2 | -- | -- |
| 172.54 | 0.613 | 6.64 | -- | -- | -- | -- | -- | -0.0484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.95 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 35 | 84.62 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 56 | 85.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 69 | 86.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 81 | 86.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 86 | 86.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 92 | 87.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 109 | 87.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 117 | 87.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 126 | 87.73 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 155 | 88.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 181 | 88.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 11 |
| 184 | 88.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 190 | 88.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 201 | 88.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 253 | 88.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 314 | 89.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 345 | 89.24 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 393 | 89.50 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 412 | 89.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 512 | 90.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 513 | 90.13 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 517 | 90.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 555 | 90.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 605 | 90.55 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 606 | 90.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 610 | 90.56 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 690 | 90.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 799 | 91.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 879 | 91.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 958 | 91.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 12 |