Os05g0384600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os05g0384600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.62 | 0.514 | 4.93 | 0.474 | 1.04 | -1.33 | -0.0768 | -1.91 | 0.193 | 8.31 | 1.238 | 5652 | -- | -- |
| 122.81 | 0.516 | 4.93 | 0.779 | 1.01 | -1.08 | -0.106 | -- | 0.198 | 8.29 | 1.791 | 5623 | -- | -- |
| 119.62 | 0.509 | 4.93 | 0.478 | 1.04 | -1.33 | -- | -1.89 | 0.194 | 8.32 | 1.239 | 5647 | -- | -- |
| 122.42 | 0.515 | 4.92 | 0.812 | 1.02 | -1.1 | -- | -- | 0.241 | 8.39 | 1.78 | 5617 | -- | -- |
| 150.32 | 0.571 | 4.94 | 0.622 | -- | -1.62 | -- | -1.76 | 0.239 | -- | 1.89 | 6733 | -- | -- |
| 146.35 | 0.567 | 4.94 | 0.577 | 1.2 | -- | 0.318 | -- | 0.0238 | 8.79 | -- | -- | -- | -- |
| 146.67 | 0.567 | 4.94 | 0.587 | 1.2 | -- | -- | -- | 0.0235 | 8.75 | -- | -- | -- | -- |
| 145.7 | 0.562 | 4.88 | 0.832 | -- | -1.99 | -- | -- | 0.46 | -- | 1.84 | 6745 | -- | -- |
| 136.71 | 0.545 | 4.92 | -- | 1.03 | -0.982 | -- | -- | 0.239 | 8.34 | 2.21 | 5612 | -- | -- |
| 228.75 | 0.707 | 4.97 | 0.589 | -- | -- | -- | -- | 0.0331 | -- | -- | -- | -- | -- |
| 155.75 | 0.584 | 4.96 | -- | 1.2 | -- | -- | -- | -0.0418 | 8.71 | -- | -- | -- | -- |
| 161.79 | 0.592 | 4.9 | -- | -- | -1.8 | -- | -- | 0.362 | -- | 2.14 | 6744 | -- | -- |
| 237.88 | 0.72 | 4.99 | -- | -- | -- | -- | -- | -0.0322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.43 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 13 |
| 2 | 116.44 | radiation | 1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 12 | 116.46 | radiation | 20 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 13 | 116.47 | radiation | 30 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 17 | 116.50 | radiation | 20 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 20 | 116.51 | radiation | 20 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 22 | 116.51 | radiation | 20 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 30 | 116.54 | radiation | 20 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 35 | 116.56 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 13 |
| 98 | 117.43 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 15 |
| 138 | 117.61 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 144 | 117.64 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 145 | 117.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 172 | 117.69 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 175 | 117.70 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 177 | 117.71 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 233 | 117.89 | temperature | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 238 | 117.91 | temperature | 30 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 248 | 117.93 | temperature | 10 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 261 | 117.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 262 | 117.95 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 276 | 117.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 280 | 117.95 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 288 | 117.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 374 | 118.05 | radiation | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 376 | 118.06 | radiation | 1 | 14400 | < th | dose independent | sin | 9 | NA |
| 394 | 118.09 | temperature | 30 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 520 | 118.24 | temperature | 10 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 615 | 118.33 | radiation | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 618 | 118.33 | temperature | 10 | 43200 | > th | dose dependent | sin | 22 | NA |
| 804 | 118.47 | temperature | 30 | 43200 | < th | dose dependent | rect. | 6 | 15 |
| 845 | 118.50 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 897 | 118.53 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 942 | 118.55 | temperature | 10 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 967 | 118.57 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 969 | 118.57 | temperature | 10 | 43200 | > th | dose dependent | no | NA | NA |