Os05g0383200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0383200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.77 | 0.425 | 9.85 | -0.939 | 1.9 | -0.595 | -0.418 | 0.993 | 0.143 | 6.75 | 19.4 | 88 | -- | -- |
| 84.75 | 0.429 | 9.86 | -0.996 | 1.89 | -0.789 | -0.406 | -- | 0.143 | 6.7 | 19.24 | 132 | -- | -- |
| 82.21 | 0.422 | 9.84 | -0.944 | 1.9 | -0.591 | -- | 1.01 | 0.144 | 6.76 | 19.39 | 87 | -- | -- |
| 85.23 | 0.43 | 9.86 | -1.01 | 1.88 | -0.796 | -- | -- | 0.127 | 6.76 | 19.2 | 130 | -- | -- |
| 214.65 | 0.682 | 9.86 | -0.658 | -- | -0.795 | -- | 1.2 | 0.121 | -- | 25.82 | 390 | -- | -- |
| 100.44 | 0.47 | 9.89 | -1.27 | 1.92 | -- | -0.546 | -- | 0.00684 | 6.48 | -- | -- | -- | -- |
| 101.16 | 0.471 | 9.89 | -1.27 | 1.92 | -- | -- | -- | 0.00886 | 6.52 | -- | -- | -- | -- |
| 198.71 | 0.657 | 9.84 | -0.892 | -- | -1.24 | -- | -- | 0.432 | -- | 25.82 | 431 | -- | -- |
| 109.93 | 0.488 | 9.84 | -- | 1.87 | -1.04 | -- | -- | 0.245 | 6.78 | 19 | 214 | -- | -- |
| 292.86 | 0.8 | 9.93 | -1.23 | -- | -- | -- | -- | 0.0485 | -- | -- | -- | -- | -- |
| 143.98 | 0.561 | 9.86 | -- | 1.9 | -- | -- | -- | 0.151 | 6.56 | -- | -- | -- | -- |
| 218.89 | 0.689 | 9.81 | -- | -- | -1.39 | -- | -- | 0.561 | -- | 25.8 | 483 | -- | -- |
| 332.57 | 0.851 | 9.9 | -- | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.19 | temperature | 20 | 90 | < th | dose independent | rect. | 19 | 12 |
| 2 | 73.35 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 4 | 73.39 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 7 | 73.55 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 13 |
| 24 | 74.03 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 10 |
| 34 | 74.34 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 8 |
| 93 | 75.72 | temperature | 20 | 10 | > th | dose independent | sin | 8 | NA |
| 114 | 76.15 | temperature | 20 | 90 | > th | dose independent | sin | 9 | NA |
| 170 | 77.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 12 |
| 175 | 77.29 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 205 | 77.68 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 246 | 78.31 | temperature | 25 | 90 | < th | dose dependent | sin | 10 | NA |
| 265 | 78.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 18 | 13 |
| 284 | 78.68 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 321 | 79.07 | temperature | 20 | 90 | > th | dose independent | rect. | 22 | 13 |
| 336 | 79.20 | temperature | 25 | 10 | < th | dose dependent | sin | 9 | NA |
| 361 | 79.34 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 11 |
| 428 | 79.87 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 442 | 79.96 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 22 |
| 458 | 80.10 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 20 |
| 499 | 80.27 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 23 |
| 502 | 80.30 | temperature | 20 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 582 | 80.75 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 13 |
| 732 | 81.52 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 10 |
| 783 | 81.73 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 12 |
| 851 | 82.03 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 20 |