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Os05g0382900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Annexin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.044) R2 : 0.649
β1 : -1.98 (0.2) R2dD : 0.139 R2D : 0.164
β2 : -- (--) R2dC : -- R2C : --
β3 : -4.53 (0.211) R2dE : 0.567 R2E : 0.154
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.45 (0.779) R2dD*E : 0.135 R2D*E : -0.0534
γ1 : 0.552 (0.0944) R2dN8 : 0.0414 R2N8 : 0.1
σ : 0.764
deviance : 269.19
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C
peak time of C : --
E
wheather : radiation
threshold : 1.096
memory length : 4557
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
267.76 0.769 11.5 -1.96 1.43 -3.47 1.86 -5.02 0.587 13.2 1.055 4316 -- --
283.73 0.785 11.6 -2.45 1.6 -2.66 1.93 -- 0.377 12.7 2.642 7137 -- --
265.44 0.759 11.5 -1.95 0.271 -4.41 -- -6.55 0.579 10.6 0.9693 4548 -- --
283.57 0.784 11.7 -2.86 1.67 -2.74 -- -- 0.315 12.2 2.503 14100 -- --
269.19 0.764 11.6 -1.98 -- -4.53 -- -6.45 0.552 -- 1.096 4557 -- --
426.78 0.968 11.5 -2.03 1.33 -- 1.62 -- 0.969 13.1 -- -- -- --
437.53 0.98 11.5 -1.97 1.34 -- -- -- 0.979 13.3 -- -- -- --
295.27 0.8 11.7 -2.8 -- -3.7 -- -- 0.327 -- 2.254 4588 -- --
445.78 0.983 11.6 -- 1.73 -1.85 -- -- 0.618 12.5 6.931 9780 -- --
547.86 1.09 11.5 -2.02 -- -- -- -- 0.951 -- -- -- -- --
540.05 1.09 11.5 -- 1.37 -- -- -- 1.2 13.4 -- -- -- --
461.91 1 11.6 -- -- -3.13 -- -- 0.718 -- 2.691 3165 -- --
655.98 1.2 11.5 -- -- -- -- -- 1.18 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 233.99 humidity 90 43200 < th dose independent rect. 20 1
3 237.11 humidity 90 43200 > th dose independent rect. 20 1
8 238.50 humidity 90 43200 > th dose independent rect. 20 3
13 239.35 humidity 90 43200 > th dose independent rect. 22 1
14 239.55 humidity 90 43200 > th dose dependent rect. 20 1
18 240.10 humidity 80 43200 > th dose independent rect. 12 6
19 240.38 humidity 90 43200 > th dose dependent rect. 19 4
22 240.83 humidity 90 43200 < th dose independent rect. 22 1
32 241.35 humidity 80 43200 < th dose independent rect. 12 5
39 241.73 humidity 80 43200 < th dose independent rect. 12 2
117 244.00 humidity 80 43200 > th dose independent rect. 16 1
139 244.64 humidity 90 43200 < th dose independent rect. 9 14
161 245.15 humidity 90 43200 < th dose independent rect. 3 21
170 245.41 humidity 90 43200 > th dose independent rect. 8 16
175 245.48 humidity 90 43200 > th dose independent rect. 4 20
179 245.61 humidity 90 43200 > th dose independent rect. 11 13
184 245.69 humidity 80 43200 > th dose dependent rect. 9 14
189 245.74 humidity 80 43200 > th dose dependent rect. 9 12
204 246.00 humidity 80 43200 > th dose dependent rect. 8 16
222 246.20 humidity 90 43200 < th dose independent sin 19 NA
257 246.55 humidity 80 43200 > th dose dependent sin 20 NA
258 246.56 humidity 70 43200 > th dose dependent rect. 13 1
264 246.63 humidity 80 43200 > th dose dependent rect. 5 19
369 247.80 humidity 80 43200 > th dose dependent rect. 9 6
398 248.14 humidity 90 43200 > th dose independent sin 19 NA
493 249.17 humidity 80 43200 > th dose dependent rect. 10 1
505 249.29 radiation 1 14400 < th dose dependent rect. 8 20
512 249.35 humidity 90 43200 > th dose independent rect. 4 6
523 249.49 humidity 80 43200 > th dose independent sin 22 NA
534 249.61 humidity 90 43200 < th dose independent rect. 15 23
538 249.64 radiation 1 14400 < th dose dependent rect. 8 11
562 249.76 humidity 90 43200 > th dose independent rect. 17 21
565 249.79 humidity 90 43200 < th dose independent rect. 17 23
575 249.86 humidity 90 43200 < th dose independent no NA NA
585 249.90 humidity 90 43200 > th dose independent rect. 17 23
590 249.92 humidity 90 43200 > th dose independent rect. 15 22
621 250.06 radiation 1 14400 < th dose dependent rect. 16 12
624 250.07 humidity 90 43200 > th dose independent rect. 9 1
641 250.17 humidity 90 43200 > th dose independent no NA NA
661 250.25 humidity 90 43200 < th dose independent rect. 11 23
662 250.25 radiation 1 14400 < th dose dependent sin 18 NA
663 250.27 radiation 1 14400 < th dose dependent rect. 13 15
684 250.36 humidity 90 43200 > th dose independent rect. 11 23
706 250.45 radiation 1 14400 < th dose dependent rect. 16 3
742 250.63 humidity 90 43200 < th dose independent rect. 22 23
743 250.63 radiation 1 14400 < th dose dependent rect. 13 6
790 250.81 humidity 90 43200 > th dose independent rect. 8 23
832 251.01 humidity 90 43200 > th dose independent rect. 22 23
840 251.09 humidity 90 43200 < th dose independent rect. 8 3
841 251.09 radiation 1 14400 < th dose independent rect. 8 11
842 251.09 radiation 1 14400 < th dose independent rect. 8 20
847 251.12 radiation 1 14400 < th dose independent rect. 8 16
852 251.13 radiation 1 14400 < th dose independent rect. 8 14
866 251.21 humidity 80 43200 > th dose dependent rect. 5 11
943 251.66 humidity 90 43200 > th dose independent sin 3 NA
983 251.91 wind 5 43200 > th dose independent rect. 11 1
1000 251.97 humidity 90 43200 < th dose independent sin 3 NA