Os05g0378800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os05g0378800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.42 | 0.276 | 9.66 | 0.723 | 1.05 | 0.497 | -0.00246 | 0.404 | 0.387 | 0.741 | 65 | 4279 | -- | -- |
| 34.55 | 0.274 | 9.66 | 0.721 | 1.06 | 0.528 | 0.0169 | -- | 0.366 | 0.717 | 65.12 | 4158 | -- | -- |
| 34.33 | 0.273 | 9.66 | 0.729 | 1.07 | 0.509 | -- | 0.393 | 0.382 | 0.735 | 65.19 | 4158 | -- | -- |
| 34.54 | 0.274 | 9.66 | 0.716 | 1.07 | 0.535 | -- | -- | 0.368 | 0.73 | 65.47 | 4157 | -- | -- |
| 81.87 | 0.424 | 9.62 | 0.773 | -- | 0.552 | -- | -0.184 | 0.49 | -- | 68 | 4613 | -- | -- |
| 39.83 | 0.296 | 9.64 | 0.731 | 1.04 | -- | -0.0757 | -- | 0.479 | 0.688 | -- | -- | -- | -- |
| 39.85 | 0.296 | 9.64 | 0.733 | 1.04 | -- | -- | -- | 0.479 | 0.687 | -- | -- | -- | -- |
| 82.02 | 0.424 | 9.62 | 0.766 | -- | 0.553 | -- | -- | 0.489 | -- | 68 | 4613 | -- | -- |
| 40.94 | 0.298 | 9.67 | -- | 1.05 | 0.68 | -- | -- | 0.324 | 0.723 | 59 | 47520 | -- | -- |
| 107.61 | 0.485 | 9.62 | 0.771 | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
| 54.03 | 0.344 | 9.65 | -- | 1.05 | -- | -- | -- | 0.398 | 0.72 | -- | -- | -- | -- |
| 97.51 | 0.461 | 9.64 | -- | -- | 0.554 | -- | -- | 0.404 | -- | 68 | 4613 | -- | -- |
| 123.28 | 0.518 | 9.64 | -- | -- | -- | -- | -- | 0.412 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 2 | 31.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 13 | 32.34 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 19 | 32.39 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 20 | 32.39 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 24 | 32.44 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 27 | 32.45 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 44 | 32.50 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 62 | 32.54 | temperature | 20.0 | 30 | < th | dose dependent | sin | 13 | NA |
| 68 | 32.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 69 | 32.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 72 | 32.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 82 | 32.59 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 94 | 32.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 100 | 32.62 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 126 | 32.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 149 | 32.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 159 | 32.74 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 249 | 32.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 258 | 32.88 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 290 | 32.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 294 | 32.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 375 | 32.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 391 | 33.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 393 | 33.00 | wind | 1.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 423 | 33.04 | wind | 9.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 475 | 33.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 477 | 33.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 536 | 33.11 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 21 | 15 |
| 640 | 33.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 641 | 33.17 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 645 | 33.17 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 648 | 33.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 727 | 33.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 751 | 33.24 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 761 | 33.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 911 | 33.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 929 | 33.37 | wind | 1.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 932 | 33.37 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 937 | 33.37 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 995 | 33.42 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |