Os05g0373900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic release factor 1) (TB3-1) (Cl1 protein).
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Os05g0373900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Eukaryotic peptide chain release factor subunit 1 (eRF1) (Eukaryotic release factor 1) (TB3-1) (Cl1 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180.9 | 0.632 | 7.82 | 2.07 | 1.67 | -1.16 | 0.5 | 0.879 | 0.348 | 11.7 | 70.25 | 294 | -- | -- |
| 182.78 | 0.63 | 7.82 | 2.11 | 1.68 | -1.14 | 0.394 | -- | 0.364 | 11.7 | 71 | 300 | -- | -- |
| 181.78 | 0.628 | 7.82 | 2.1 | 1.7 | -1.18 | -- | 0.726 | 0.347 | 11.6 | 71 | 309 | -- | -- |
| 183.08 | 0.63 | 7.82 | 2.14 | 1.69 | -1.14 | -- | -- | 0.358 | 11.7 | 71 | 303 | -- | -- |
| 257.84 | 0.752 | 7.87 | 2.07 | -- | -1.9 | -- | 0.383 | 0.29 | -- | 66.63 | 47 | -- | -- |
| 207.3 | 0.675 | 7.81 | 2.08 | 2.07 | -- | 0.36 | -- | 0.461 | 13.2 | -- | -- | -- | -- |
| 207.83 | 0.675 | 7.81 | 2.09 | 2.07 | -- | -- | -- | 0.463 | 13.3 | -- | -- | -- | -- |
| 258.37 | 0.752 | 7.87 | 2.08 | -- | -1.89 | -- | -- | 0.293 | -- | 66.65 | 23 | -- | -- |
| 302.42 | 0.81 | 7.87 | -- | 1.67 | -1.03 | -- | -- | 0.163 | 11.9 | 66 | 288 | -- | -- |
| 471.4 | 1.01 | 7.84 | 2.01 | -- | -- | -- | -- | 0.421 | -- | -- | -- | -- | -- |
| 323.27 | 0.841 | 7.86 | -- | 2.03 | -- | -- | -- | 0.23 | 13.2 | -- | -- | -- | -- |
| 372.13 | 0.898 | 7.92 | -- | -- | -1.88 | -- | -- | 0.0651 | -- | 66 | 9 | -- | -- |
| 578.26 | 1.12 | 7.89 | -- | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 4 | 172.16 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 5 | 172.32 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 6 | 172.47 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 36 | 173.89 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 58 | 174.41 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 61 | 174.46 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 93 | 174.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 95 | 174.83 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 99 | 174.97 | humidity | 80.0 | 270 | < th | dose independent | rect. | 20 | 21 |
| 107 | 175.16 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 109 | 175.23 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 139 | 175.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 142 | 176.01 | wind | 3.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 169 | 176.36 | humidity | 80.0 | 270 | < th | dose independent | rect. | 23 | 17 |
| 170 | 176.39 | wind | 3.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 177 | 176.45 | humidity | 80.0 | 270 | > th | dose independent | rect. | 6 | 14 |
| 188 | 176.59 | humidity | 80.0 | 270 | < th | dose independent | sin | 1 | NA |
| 199 | 176.68 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 218 | 176.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 248 | 177.24 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 251 | 177.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 260 | 177.34 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 9 |
| 275 | 177.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 282 | 177.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 287 | 177.55 | humidity | 80.0 | 270 | > th | dose independent | sin | 1 | NA |
| 289 | 177.56 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 11 |
| 296 | 177.60 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 299 | 177.62 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 340 | 177.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 12 |
| 349 | 177.93 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 365 | 178.00 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 370 | 178.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 379 | 178.05 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 383 | 178.07 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 410 | 178.17 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 411 | 178.18 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 417 | 178.19 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 423 | 178.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 429 | 178.25 | wind | 3.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 435 | 178.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 439 | 178.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 458 | 178.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 463 | 178.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 499 | 178.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 530 | 178.66 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 594 | 178.98 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 638 | 179.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 652 | 179.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 704 | 179.53 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 717 | 179.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 737 | 179.69 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 761 | 179.78 | humidity | 70.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 909 | 180.43 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 947 | 180.60 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 997 | 180.85 | humidity | 80.0 | 270 | < th | dose independent | rect. | 23 | 22 |