Os05g0372300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0372300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 288.67 | 0.798 | 3.19 | 0.402 | 0.0934 | -1.05 | 1.75 | -0.0141 | 0.00512 | 22.9 | 1010 | 4198 | -- | -- |
| 288.63 | 0.791 | 3.19 | 0.405 | 0.101 | -1.04 | 1.75 | -- | -0.00315 | 22.9 | 1010 | 4012 | -- | -- |
| 298.35 | 0.804 | 3.18 | 0.34 | 0.265 | -0.988 | -- | 0.00394 | 0.0604 | 18.3 | 1010 | 4219 | -- | -- |
| 298.32 | 0.804 | 3.18 | 0.322 | 0.273 | -1 | -- | -- | 0.0537 | 18.3 | 1010 | 4221 | -- | -- |
| 302.09 | 0.81 | 3.18 | 0.29 | -- | -1.03 | -- | -0.133 | 0.0428 | -- | 1010 | 4196 | -- | -- |
| 323.24 | 0.843 | 3.21 | 0.0904 | 0.0948 | -- | 1.69 | -- | -0.0851 | 22.7 | -- | -- | -- | -- |
| 330.07 | 0.851 | 3.22 | 0.0334 | 0.327 | -- | -- | -- | -0.0824 | 18 | -- | -- | -- | -- |
| 301.97 | 0.809 | 3.19 | 0.333 | -- | -1.03 | -- | -- | -0.000632 | -- | 1010 | 4202 | -- | -- |
| 301.04 | 0.808 | 3.18 | -- | 0.284 | -0.933 | -- | -- | 0.065 | 18.2 | 1010 | 4681 | -- | -- |
| 335.61 | 0.856 | 3.21 | 0.0237 | -- | -- | -- | -- | -0.0899 | -- | -- | -- | -- | -- |
| 330.1 | 0.85 | 3.22 | -- | 0.327 | -- | -- | -- | -0.0861 | 18 | -- | -- | -- | -- |
| 304.69 | 0.813 | 3.19 | -- | -- | -0.952 | -- | -- | 0.00692 | -- | 1010 | 4194 | -- | -- |
| 335.62 | 0.855 | 3.21 | -- | -- | -- | -- | -- | -0.0925 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 283.77 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 283.99 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 6 | 284.38 | radiation | 10 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 7 | 284.53 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 8 | 284.53 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 14 | 284.54 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 16 | 284.55 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 18 | 284.57 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 19 | 284.57 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 29 | 284.61 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 48 | 285.28 | radiation | 30 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 59 | 285.44 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 65 | 285.50 | radiation | 10 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 86 | 285.59 | radiation | 20 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 99 | 285.76 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 100 | 285.76 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 186 | 286.26 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 197 | 286.27 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 224 | 286.46 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 228 | 286.47 | radiation | 10 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 250 | 286.54 | radiation | 40 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 285 | 286.63 | atmosphere | 1010 | 4320 | > th | dose independent | sin | 11 | NA |
| 302 | 286.66 | atmosphere | 1010 | 4320 | < th | dose independent | sin | 11 | NA |
| 380 | 286.95 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 23 | 3 |
| 430 | 287.13 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 537 | 287.43 | radiation | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 587 | 287.58 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 592 | 287.59 | radiation | 10 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 629 | 287.69 | atmosphere | 1005 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 666 | 287.91 | radiation | 10 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 676 | 287.93 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 760 | 288.09 | atmosphere | 1005 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 766 | 288.10 | atmosphere | 1005 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 858 | 288.33 | radiation | 20 | 14400 | < th | dose dependent | sin | 13 | NA |
| 891 | 288.40 | radiation | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 930 | 288.51 | radiation | 1 | 14400 | > th | dose dependent | sin | 12 | NA |