Os05g0372200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Surfeit locus 6 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0372200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Surfeit locus 6 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.93 | 0.329 | 10.7 | 0.832 | 0.857 | 0.706 | 0.347 | 0.956 | -0.229 | 14.4 | 82 | 9478 | -- | -- |
| 50.23 | 0.33 | 10.7 | 0.757 | 0.839 | 0.685 | 0.309 | -- | -0.246 | 14.4 | 83.77 | 9386 | -- | -- |
| 49.31 | 0.327 | 10.7 | 0.841 | 0.845 | 0.708 | -- | 0.934 | -0.237 | 14.4 | 83.6 | 9373 | -- | -- |
| 50.57 | 0.331 | 10.7 | 0.763 | 0.841 | 0.68 | -- | -- | -0.244 | 14.4 | 84 | 9391 | -- | -- |
| 66.83 | 0.383 | 10.7 | 0.632 | -- | 1.05 | -- | 0.382 | -0.107 | -- | 88 | 8982 | -- | -- |
| 56.73 | 0.353 | 10.7 | 0.669 | 0.838 | -- | 0.309 | -- | -0.114 | 14.6 | -- | -- | -- | -- |
| 57.07 | 0.354 | 10.7 | 0.677 | 0.838 | -- | -- | -- | -0.112 | 14.6 | -- | -- | -- | -- |
| 67.11 | 0.383 | 10.7 | 0.629 | -- | 1.06 | -- | -- | -0.107 | -- | 88 | 8982 | -- | -- |
| 64.15 | 0.373 | 10.7 | -- | 0.836 | 0.6 | -- | -- | -0.227 | 14.6 | 77.77 | 5741 | -- | -- |
| 98.15 | 0.463 | 10.7 | 0.641 | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
| 69.13 | 0.389 | 10.7 | -- | 0.825 | -- | -- | -- | -0.188 | 14.6 | -- | -- | -- | -- |
| 77.54 | 0.411 | 10.7 | -- | -- | 1.06 | -- | -- | -0.177 | -- | 88 | 8982 | -- | -- |
| 108.99 | 0.487 | 10.7 | -- | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.71 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 2 | 49.30 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 49.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 6 | 49.55 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 7 | 49.60 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 8 | 49.63 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 20 | 49.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 21 | 49.73 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 22 | 49.73 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 19 |
| 23 | 49.74 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 15 |
| 24 | 49.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 25 | 49.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 26 | 49.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 28 | 49.76 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 31 | 49.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 15 |
| 32 | 49.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 15 |
| 33 | 49.77 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 37 | 49.77 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 43 | 49.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 47 | 49.84 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 48 | 49.84 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 17 |
| 49 | 49.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 51 | 49.84 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 52 | 49.85 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 17 |
| 69 | 49.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 81 | 49.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 83 | 49.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 100 | 49.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 102 | 50.00 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 128 | 50.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 137 | 50.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 140 | 50.08 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 151 | 50.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 164 | 50.11 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 169 | 50.13 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 2 | NA |
| 173 | 50.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 181 | 50.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 184 | 50.17 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 185 | 50.17 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 191 | 50.18 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 201 | 50.19 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 207 | 50.19 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 254 | 50.28 | humidity | 60.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 335 | 50.37 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 358 | 50.40 | humidity | 60.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 359 | 50.40 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 407 | 50.45 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 458 | 50.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 472 | 50.52 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 482 | 50.54 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 508 | 50.56 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 533 | 50.57 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 6 | 5 |
| 546 | 50.57 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 17 |
| 630 | 50.64 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 636 | 50.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 637 | 50.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 658 | 50.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 702 | 50.68 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 716 | 50.68 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 726 | 50.69 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 802 | 50.69 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 820 | 50.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 845 | 50.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 874 | 50.73 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 905 | 50.74 | humidity | 60.0 | 14400 | < th | dose independent | no | NA | NA |
| 987 | 50.74 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 23 |