Os05g0370600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0370600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : C2 calcium/lipid-binding region, CaLB domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.12 | 0.532 | 5.89 | -0.351 | 0.718 | -0.982 | 1.35 | -0.632 | -0.615 | 2.05 | 62.87 | 27 | -- | -- |
| 128.8 | 0.529 | 5.89 | -0.399 | 0.687 | -0.968 | 1.06 | -- | -0.617 | 1.92 | 64.5 | 23 | -- | -- |
| 131.51 | 0.534 | 5.9 | -0.422 | 0.687 | -0.933 | -- | 0.351 | -0.635 | 1.91 | 64.66 | 24 | -- | -- |
| 131.96 | 0.535 | 5.9 | -0.412 | 0.684 | -0.921 | -- | -- | -0.632 | 1.92 | 64.62 | 23 | -- | -- |
| 142.46 | 0.556 | 5.88 | -0.414 | -- | -0.466 | -- | 0.471 | -0.566 | -- | 53.3 | 52 | -- | -- |
| 149.2 | 0.573 | 5.88 | -0.396 | 0.0524 | -- | -0.768 | -- | -0.558 | 15.5 | -- | -- | -- | -- |
| 150.41 | 0.574 | 5.88 | -0.409 | 0.117 | -- | -- | -- | -0.562 | 19.5 | -- | -- | -- | -- |
| 143.01 | 0.557 | 5.88 | -0.399 | -- | -0.442 | -- | -- | -0.568 | -- | 55 | 52 | -- | -- |
| 136.42 | 0.544 | 5.89 | -- | 0.677 | -0.923 | -- | -- | -0.586 | 1.91 | 64.58 | 24 | -- | -- |
| 151.15 | 0.574 | 5.88 | -0.411 | -- | -- | -- | -- | -0.564 | -- | -- | -- | -- | -- |
| 154.83 | 0.582 | 5.87 | -- | 0.121 | -- | -- | -- | -0.516 | 19.3 | -- | -- | -- | -- |
| 147.2 | 0.565 | 5.87 | -- | -- | -0.404 | -- | -- | -0.534 | -- | 62.21 | 51 | -- | -- |
| 155.6 | 0.582 | 5.87 | -- | -- | -- | -- | -- | -0.518 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.43 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 3 | 121.09 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 9 | 125.51 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 11 | 125.66 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 12 |
| 16 | 126.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 18 | 126.28 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 22 | 126.48 | humidity | 80.0 | 720 | > th | dose independent | rect. | 5 | 16 |
| 27 | 126.64 | humidity | 70.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 30 | 126.71 | humidity | 80.0 | 10 | > th | dose independent | sin | 23 | NA |
| 34 | 126.84 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 37 | 126.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 43 | 127.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 53 | 127.22 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 62 | 127.35 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 19 |
| 74 | 127.47 | humidity | 80.0 | 10 | < th | dose independent | sin | 23 | NA |
| 84 | 127.59 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 107 | 127.84 | humidity | 80.0 | 720 | > th | dose independent | sin | 0 | NA |
| 109 | 127.84 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 154 | 128.27 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 166 | 128.33 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 174 | 128.38 | humidity | 80.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 188 | 128.53 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 205 | 128.67 | humidity | 60.0 | 30 | > th | dose dependent | no | NA | NA |
| 218 | 128.75 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 243 | 128.93 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 263 | 129.04 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 264 | 129.05 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 265 | 129.05 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 299 | 129.21 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 335 | 129.40 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 351 | 129.52 | humidity | 80.0 | 720 | < th | dose independent | rect. | 6 | 15 |
| 411 | 129.76 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 414 | 129.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 434 | 129.87 | humidity | 70.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 478 | 130.08 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 8 | 15 |
| 548 | 130.32 | humidity | 90.0 | 10 | < th | dose dependent | no | NA | NA |
| 550 | 130.33 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 590 | 130.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 593 | 130.47 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 614 | 130.55 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 615 | 130.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 628 | 130.56 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 661 | 130.67 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 668 | 130.68 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 690 | 130.74 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 711 | 130.81 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 712 | 130.81 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 717 | 130.82 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 728 | 130.86 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 729 | 130.86 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 4 |
| 736 | 130.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 738 | 130.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 6 |
| 742 | 130.87 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 758 | 130.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 804 | 131.02 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 8 |
| 819 | 131.05 | humidity | 70.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 838 | 131.09 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 862 | 131.16 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 6 |
| 932 | 131.30 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 944 | 131.32 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 959 | 131.35 | humidity | 80.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 964 | 131.36 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 971 | 131.37 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 13 |