Os05g0368700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease (Fragment).
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Os05g0368700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.78 | 0.293 | 3.24 | 0.145 | 0.204 | 0.196 | -0.299 | 1.13 | -0.06 | 6.93 | 90.53 | 5900 | -- | -- |
| 40.36 | 0.296 | 3.24 | 0.0671 | 0.208 | 0.279 | -0.33 | -- | -0.0973 | 6.64 | 118.6 | 4438 | -- | -- |
| 39.01 | 0.291 | 3.24 | 0.147 | 0.204 | 0.195 | -- | 1.15 | -0.0602 | 7.01 | 91 | 5929 | -- | -- |
| 40.61 | 0.297 | 3.24 | 0.0616 | 0.204 | 0.275 | -- | -- | -0.0942 | 6.97 | 154.7 | 4329 | -- | -- |
| 41.17 | 0.299 | 3.25 | 0.146 | -- | 0.197 | -- | 1.13 | -0.0569 | -- | 91 | 5841 | -- | -- |
| 41.3 | 0.301 | 3.23 | 0.0551 | 0.203 | -- | -0.316 | -- | -0.0377 | 6.84 | -- | -- | -- | -- |
| 41.55 | 0.302 | 3.23 | 0.05 | 0.202 | -- | -- | -- | -0.0367 | 7.05 | -- | -- | -- | -- |
| 42.77 | 0.305 | 3.24 | 0.0665 | -- | 0.273 | -- | -- | -0.0896 | -- | 191.4 | 4270 | -- | -- |
| 40.72 | 0.297 | 3.24 | -- | 0.204 | 0.268 | -- | -- | -0.1 | 6.96 | 139.6 | 4329 | -- | -- |
| 43.7 | 0.309 | 3.23 | 0.054 | -- | -- | -- | -- | -0.033 | -- | -- | -- | -- | -- |
| 41.61 | 0.302 | 3.23 | -- | 0.202 | -- | -- | -- | -0.0423 | 7.03 | -- | -- | -- | -- |
| 42.89 | 0.305 | 3.24 | -- | -- | 0.267 | -- | -- | -0.0957 | -- | 210.7 | 4271 | -- | -- |
| 43.77 | 0.309 | 3.23 | -- | -- | -- | -- | -- | -0.039 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.35 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 35.37 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 6 | 35.70 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 26 | 36.31 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 53 | 37.53 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 57 | 37.89 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 58 | 37.92 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 6 |
| 67 | 38.07 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 80 | 38.26 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 83 | 38.32 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 96 | 38.44 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 103 | 38.53 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 107 | 38.56 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 108 | 38.56 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 113 | 38.57 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 128 | 38.58 | wind | 7.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 129 | 38.58 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 137 | 38.60 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 150 | 38.61 | wind | 5.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 161 | 38.65 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 167 | 38.68 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 182 | 38.77 | temperature | 25.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 183 | 38.77 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 185 | 38.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 186 | 38.78 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 187 | 38.79 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 197 | 38.82 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 212 | 38.83 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 215 | 38.83 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 224 | 38.85 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 226 | 38.85 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 227 | 38.85 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 229 | 38.85 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 230 | 38.85 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 232 | 38.85 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 234 | 38.85 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 250 | 38.87 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 253 | 38.88 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 12 |
| 256 | 38.89 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 260 | 38.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 265 | 38.89 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 267 | 38.89 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 270 | 38.89 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 271 | 38.89 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 272 | 38.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 279 | 38.89 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 282 | 38.90 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 283 | 38.90 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 285 | 38.90 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 293 | 38.90 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 332 | 38.92 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 364 | 38.94 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 386 | 38.95 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 23 |
| 408 | 38.95 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 439 | 38.97 | humidity | 70.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 450 | 38.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 452 | 38.97 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 4 | NA |
| 525 | 38.99 | radiation | 40.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 582 | 39.00 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 608 | 39.00 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 646 | 39.01 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 739 | 39.03 | humidity | 70.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 877 | 39.06 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 878 | 39.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 913 | 39.07 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 940 | 39.07 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |