Os05g0367200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0367200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.68 | 0.384 | 7.38 | 0.212 | 0.107 | 0.97 | -1.57 | 0.982 | 0.201 | 17.6 | 1010 | 24830 | -- | -- |
| 67.32 | 0.382 | 7.43 | -0.223 | 0.118 | 0.969 | -1.68 | -- | 0.0776 | 17.5 | 1010 | 28606 | -- | -- |
| 71.11 | 0.393 | 7.38 | 0.128 | 0.0905 | 0.993 | -- | 1.21 | 0.115 | 20 | 1011 | 31479 | -- | -- |
| 72.27 | 0.396 | 7.42 | -0.16 | 0.199 | 0.904 | -- | -- | 0.0976 | 21.6 | 1011 | 28628 | -- | -- |
| 72.2 | 0.396 | 7.37 | 0.116 | -- | 1.07 | -- | 1.26 | 0.12 | -- | 1011 | 31664 | -- | -- |
| 95.92 | 0.459 | 7.38 | 0.362 | 0.0689 | -- | -1.63 | -- | 0.306 | 17.3 | -- | -- | -- | -- |
| 100.42 | 0.469 | 7.38 | 0.36 | 0.197 | -- | -- | -- | 0.297 | 22 | -- | -- | -- | -- |
| 73.73 | 0.4 | 7.44 | -0.304 | -- | 1.14 | -- | -- | 0.025 | -- | 1010 | 30866 | -- | -- |
| 72.92 | 0.398 | 7.43 | -- | 0.191 | 0.871 | -- | -- | 0.0738 | 21.6 | 1011 | 28628 | -- | -- |
| 102.76 | 0.474 | 7.38 | 0.363 | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
| 103.84 | 0.477 | 7.39 | -- | 0.199 | -- | -- | -- | 0.257 | 22.2 | -- | -- | -- | -- |
| 75.07 | 0.404 | 7.43 | -- | -- | 0.873 | -- | -- | 0.0734 | -- | 1011 | 28610 | -- | -- |
| 106.23 | 0.481 | 7.39 | -- | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.79 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 3 | 65.91 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 4 | 66.53 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 6 | 66.89 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 11 | 67.00 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 14 | 67.08 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 15 | 67.14 | radiation | 40 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 19 | 67.15 | radiation | 30 | 43200 | < th | dose dependent | rect. | 12 | 7 |
| 41 | 67.18 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 43 | 67.19 | radiation | 40 | 43200 | < th | dose dependent | sin | 16 | NA |
| 44 | 67.20 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 49 | 67.24 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 62 | 67.28 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 80 | 67.30 | radiation | 1 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 96 | 67.32 | radiation | 10 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 102 | 67.34 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 103 | 67.34 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 110 | 67.35 | humidity | 50 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 122 | 67.36 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 124 | 67.36 | radiation | 1 | 43200 | > th | dose dependent | sin | 16 | NA |
| 127 | 67.37 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 130 | 67.37 | humidity | 50 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 203 | 67.49 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 225 | 67.51 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 235 | 67.52 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 249 | 67.54 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 254 | 67.55 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 307 | 67.59 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 354 | 67.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 385 | 67.70 | humidity | 50 | 43200 | > th | dose independent | sin | 2 | NA |
| 419 | 67.74 | radiation | 30 | 43200 | < th | dose independent | rect. | 12 | 13 |
| 426 | 67.74 | radiation | 10 | 43200 | < th | dose dependent | rect. | 15 | 18 |
| 452 | 67.76 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 479 | 67.78 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 526 | 67.81 | radiation | 30 | 43200 | > th | dose independent | sin | 17 | NA |
| 568 | 67.85 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 593 | 67.86 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 594 | 67.86 | humidity | 60 | 43200 | < th | dose dependent | sin | 7 | NA |
| 645 | 67.89 | radiation | 30 | 43200 | < th | dose independent | sin | 16 | NA |
| 659 | 67.92 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 662 | 67.92 | radiation | 10 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 719 | 67.98 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 751 | 67.99 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 755 | 67.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 832 | 68.03 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 961 | 68.11 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 6 |