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Os05g0367100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.86 (0.0243) R2 : 0.512
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.07 (0.063) R2dC : 0.313 R2C : 0.343
β3 : -0.698 (0.0644) R2dE : 0.136 R2E : 0.105
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.386 (0.0526) R2dN8 : 0.0796 R2N8 : 0.0227
σ : 0.454
deviance : 94.89
__
_____
C
peak time of C : 16.7
E
wheather : temperature
threshold : 31.47
memory length : 1171
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.8 0.43 9.98 -0.54 1.06 0.0184 0.402 -7.02 -0.342 16.8 30.9 1167 -- --
90.78 0.444 9.86 0.554 1.08 -0.762 0.876 -- -0.337 16.9 30.19 2563 -- --
84.17 0.427 9.98 -0.542 1.06 0.0214 -- -7.09 -0.338 16.8 31.2 1167 -- --
86.11 0.432 9.85 0.601 1.05 -0.777 -- -- -0.347 16.8 31.2 1172 -- --
143.13 0.557 10 -0.794 -- 0.108 -- -8.8 -0.366 -- 31.67 1173 -- --
113.88 0.5 9.82 0.394 1.15 -- 0.564 -- -0.199 16.5 -- -- -- --
114.74 0.502 9.82 0.398 1.15 -- -- -- -0.196 16.5 -- -- -- --
146.61 0.564 9.85 0.569 -- -0.864 -- -- -0.38 -- 31.84 1176 -- --
94.89 0.454 9.86 -- 1.07 -0.698 -- -- -0.386 16.7 31.47 1171 -- --
185.48 0.636 9.81 0.353 -- -- -- -- -0.227 -- -- -- -- --
118.91 0.51 9.83 -- 1.14 -- -- -- -0.241 16.5 -- -- -- --
154.95 0.58 9.85 -- -- -0.812 -- -- -0.424 -- 31.71 1175 -- --
188.77 0.641 9.82 -- -- -- -- -- -0.266 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.09 temperature 10.0 270 > th dose dependent rect. 13 17
12 79.49 temperature 15.0 10 > th dose dependent rect. 14 18
60 83.15 temperature 10.0 90 > th dose dependent rect. 3 5
64 83.35 temperature 10.0 270 > th dose dependent rect. 24 7
75 83.76 wind 7.0 90 < th dose dependent rect. 3 5
81 83.94 wind 9.0 270 < th dose dependent rect. 24 7
86 84.01 temperature 15.0 270 > th dose independent rect. 13 17
99 84.34 wind 5.0 270 < th dose independent rect. 24 7
117 84.60 wind 5.0 90 < th dose independent rect. 3 5
122 84.77 atmosphere 1010.0 90 < th dose independent rect. 14 18
123 84.79 wind 3.0 270 < th dose independent rect. 1 5
125 84.85 temperature 15.0 10 > th dose dependent rect. 3 5
126 84.87 temperature 10.0 10 > th dose dependent rect. 2 7
129 84.93 wind 7.0 10 < th dose dependent rect. 3 6
141 85.12 atmosphere 1015.0 90 < th dose dependent rect. 3 5
145 85.17 atmosphere 1015.0 90 < th dose dependent rect. 15 17
146 85.18 precipitation 0.1 270 < th dose independent rect. 14 16
147 85.18 precipitation 0.1 270 < th dose dependent rect. 14 16
151 85.22 precipitation 0.1 90 < th dose independent rect. 3 5
153 85.22 precipitation 0.1 90 < th dose dependent rect. 3 5
154 85.22 temperature 10.0 270 > th dose dependent rect. 11 9
178 85.48 temperature 15.0 270 > th dose dependent rect. 3 2
190 85.59 humidity 50.0 270 > th dose dependent rect. 17 8
192 85.61 temperature 30.0 90 < th dose dependent rect. 19 8
193 85.62 wind 7.0 270 < th dose dependent rect. 3 2
200 85.68 temperature 10.0 90 > th dose independent rect. 3 5
202 85.68 temperature 30.0 90 < th dose independent rect. 3 5
203 85.68 humidity 50.0 90 > th dose independent rect. 3 5
205 85.68 atmosphere 995.0 90 > th dose independent rect. 3 5
206 85.68 atmosphere 1015.0 90 < th dose independent rect. 3 5
207 85.68 temperature 10.0 90 > th dose independent rect. 8 19
214 85.73 radiation 40.0 90 < th dose independent rect. 3 5
215 85.73 atmosphere 1015.0 270 < th dose dependent rect. 3 2
226 85.79 temperature 30.0 270 < th dose independent rect. 17 8
231 85.83 humidity 50.0 270 > th dose independent rect. 6 19
241 85.90 precipitation 0.1 270 < th dose independent rect. 24 7
242 85.90 precipitation 0.1 270 < th dose dependent rect. 24 7
250 86.00 radiation 1.0 270 < th dose independent rect. 17 8
251 86.01 wind 9.0 90 < th dose independent rect. 8 19
253 86.02 wind 3.0 270 < th dose independent rect. 3 2
263 86.07 humidity 50.0 90 > th dose independent rect. 8 19
269 86.12 radiation 20.0 270 < th dose independent rect. 24 8
270 86.12 radiation 40.0 270 < th dose dependent rect. 24 8
271 86.13 radiation 10.0 270 < th dose dependent rect. 16 9
287 86.23 atmosphere 995.0 90 > th dose independent rect. 8 19
296 86.29 humidity 50.0 270 > th dose independent rect. 6 7
302 86.33 radiation 1.0 270 < th dose independent rect. 8 17
303 86.35 radiation 1.0 270 < th dose dependent rect. 8 17
313 86.45 humidity 50.0 90 > th dose dependent rect. 3 5
315 86.45 radiation 1.0 270 < th dose dependent rect. 5 21
316 86.47 radiation 20.0 270 < th dose dependent rect. 1 6
318 86.49 humidity 50.0 270 > th dose dependent rect. 24 7
320 86.50 temperature 15.0 270 > th dose independent rect. 11 9
328 86.52 temperature 15.0 270 > th dose independent rect. 24 7
329 86.53 humidity 70.0 270 > th dose independent rect. 24 7
330 86.53 atmosphere 1015.0 270 < th dose independent rect. 24 7
335 86.54 temperature 30.0 270 < th dose independent rect. 24 7
336 86.54 humidity 50.0 270 > th dose independent rect. 24 7
338 86.54 atmosphere 995.0 270 > th dose independent rect. 24 7
341 86.54 temperature 10.0 270 > th dose independent rect. 7 17
342 86.54 humidity 50.0 270 > th dose dependent rect. 1 5
344 86.55 temperature 10.0 270 > th dose independent rect. 6 8
345 86.55 atmosphere 995.0 270 > th dose independent rect. 6 8
346 86.55 atmosphere 1015.0 270 < th dose independent rect. 6 8
348 86.55 temperature 20.0 10 > th dose independent rect. 14 19
363 86.58 precipitation 0.1 270 < th dose independent rect. 6 8
365 86.58 precipitation 0.1 270 < th dose dependent rect. 6 8
372 86.63 humidity 60.0 270 > th dose independent rect. 17 8
377 86.65 wind 9.0 270 < th dose independent rect. 6 8
382 86.67 wind 9.0 270 < th dose independent rect. 7 17
398 86.70 precipitation 0.1 270 < th dose independent rect. 1 17
399 86.70 precipitation 0.1 270 < th dose dependent rect. 1 17
405 86.74 humidity 80.0 270 > th dose independent rect. 1 5
407 86.75 precipitation 0.1 270 < th dose independent rect. 3 2
410 86.75 precipitation 0.1 270 < th dose dependent rect. 3 2
423 86.78 radiation 20.0 270 < th dose independent rect. 1 5
426 86.78 temperature 10.0 270 > th dose independent rect. 6 19
438 86.83 wind 9.0 270 < th dose independent rect. 14 16
439 86.83 wind 9.0 270 < th dose independent rect. 6 19
454 86.91 temperature 15.0 270 > th dose independent rect. 1 17
457 86.92 wind 5.0 10 < th dose independent rect. 2 7
476 86.99 precipitation 0.1 270 < th dose independent rect. 11 9
478 86.99 humidity 50.0 270 > th dose dependent rect. 3 2
480 86.99 precipitation 0.1 270 < th dose dependent rect. 11 9
505 87.03 precipitation 0.1 10 < th dose independent rect. 2 7
507 87.03 precipitation 0.1 10 < th dose dependent rect. 2 7
532 87.13 atmosphere 995.0 90 > th dose dependent rect. 19 8
535 87.14 atmosphere 995.0 270 > th dose independent rect. 7 17
540 87.15 atmosphere 995.0 270 > th dose independent rect. 6 19
550 87.20 humidity 50.0 270 > th dose independent rect. 5 21
557 87.22 precipitation 0.1 90 < th dose independent rect. 8 19
560 87.22 precipitation 0.1 90 < th dose dependent rect. 8 19
561 87.23 atmosphere 1010.0 270 < th dose independent rect. 11 9
571 87.26 humidity 50.0 270 > th dose independent rect. 20 15
574 87.27 humidity 80.0 270 > th dose independent rect. 3 2
579 87.29 atmosphere 1000.0 270 > th dose independent rect. 19 6
583 87.30 atmosphere 1015.0 270 < th dose dependent rect. 1 5
654 87.59 wind 1.0 270 > th dose independent rect. 11 9
660 87.61 temperature 10.0 270 > th dose independent rect. 3 2
662 87.61 temperature 30.0 270 < th dose independent rect. 3 2
663 87.61 humidity 50.0 270 > th dose independent rect. 3 2
666 87.61 atmosphere 995.0 270 > th dose independent rect. 3 2
667 87.61 atmosphere 1010.0 270 < th dose independent rect. 3 2
669 87.61 radiation 20.0 270 < th dose independent rect. 3 2
674 87.61 temperature 10.0 270 > th dose independent rect. 5 22
678 87.62 temperature 10.0 270 > th dose independent rect. 20 15
679 87.62 atmosphere 995.0 270 > th dose independent rect. 20 15
685 87.63 radiation 30.0 270 < th dose dependent rect. 3 2
703 87.68 radiation 1.0 270 < th dose independent rect. 3 2
706 87.68 temperature 10.0 10 > th dose independent rect. 2 7
708 87.68 temperature 30.0 10 < th dose independent rect. 2 7
709 87.68 humidity 50.0 10 > th dose independent rect. 2 7
711 87.68 atmosphere 995.0 10 > th dose independent rect. 2 7
712 87.68 atmosphere 1015.0 10 < th dose independent rect. 2 7
714 87.68 temperature 10.0 10 > th dose independent rect. 9 17
721 87.71 temperature 30.0 90 < th dose dependent rect. 8 19
757 87.81 atmosphere 1015.0 10 < th dose dependent rect. 2 7
760 87.82 wind 9.0 270 < th dose independent rect. 20 15
762 87.84 wind 9.0 270 < th dose independent rect. 18 7
771 87.85 wind 9.0 270 < th dose independent rect. 5 22
781 87.88 temperature 25.0 720 > th dose dependent rect. 17 15
783 87.89 temperature 10.0 270 > th dose independent rect. 18 7
789 87.89 atmosphere 1015.0 270 < th dose independent rect. 1 17
796 87.92 temperature 10.0 270 > th dose dependent rect. 1 18
834 88.02 temperature 30.0 10 < th dose dependent rect. 20 8
845 88.04 temperature 15.0 270 > th dose independent rect. 10 22
849 88.06 radiation 40.0 10 < th dose independent rect. 2 7
859 88.08 radiation 40.0 90 < th dose dependent rect. 3 5
877 88.14 wind 9.0 270 < th dose independent rect. 11 9
879 88.14 precipitation 0.1 10 < th dose independent rect. 9 17
882 88.14 precipitation 0.1 10 < th dose dependent rect. 9 17
894 88.17 wind 9.0 270 < th dose independent rect. 1 17
930 88.26 atmosphere 995.0 10 > th dose independent rect. 9 17
933 88.27 precipitation 0.1 90 < th dose independent rect. 8 7
934 88.27 wind 9.0 10 < th dose independent rect. 9 17
935 88.27 precipitation 0.1 90 < th dose dependent rect. 8 7
975 88.34 temperature 10.0 90 > th dose independent rect. 8 7
976 88.34 atmosphere 1015.0 90 < th dose independent rect. 8 7