Os05g0366900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0366900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.78 | 0.285 | 3.19 | 0.175 | 0.141 | 0.235 | 0.0484 | 1.03 | -0.0797 | 8.83 | 89 | 5928 | -- | -- |
| 38.35 | 0.288 | 3.18 | 0.126 | 0.16 | 0.259 | 0.0392 | -- | -0.0926 | 8.83 | 89 | 6464 | -- | -- |
| 36.79 | 0.282 | 3.19 | 0.177 | 0.141 | 0.235 | -- | 1.03 | -0.0798 | 8.74 | 89 | 5928 | -- | -- |
| 38.34 | 0.288 | 3.18 | 0.119 | 0.164 | 0.262 | -- | -- | -0.096 | 8.53 | 88 | 6396 | -- | -- |
| 37.91 | 0.287 | 3.19 | 0.175 | -- | 0.235 | -- | 1.01 | -0.0782 | -- | 88.86 | 5900 | -- | -- |
| 39.25 | 0.294 | 3.17 | 0.0968 | 0.138 | -- | 0.0422 | -- | -0.0492 | 8.83 | -- | -- | -- | -- |
| 39.26 | 0.293 | 3.17 | 0.098 | 0.138 | -- | -- | -- | -0.0493 | 8.73 | -- | -- | -- | -- |
| 39.4 | 0.292 | 3.19 | 0.127 | -- | 0.26 | -- | -- | -0.103 | -- | 88 | 7232 | -- | -- |
| 38.67 | 0.29 | 3.19 | -- | 0.145 | 0.262 | -- | -- | -0.116 | 8.45 | 88 | 5876 | -- | -- |
| 40.34 | 0.297 | 3.18 | 0.0983 | -- | -- | -- | -- | -0.0482 | -- | -- | -- | -- | -- |
| 39.51 | 0.294 | 3.18 | -- | 0.139 | -- | -- | -- | -0.0602 | 8.68 | -- | -- | -- | -- |
| 39.72 | 0.294 | 3.19 | -- | -- | 0.256 | -- | -- | -0.106 | -- | 87 | 5836 | -- | -- |
| 40.59 | 0.297 | 3.18 | -- | -- | -- | -- | -- | -0.0591 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.38 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 35.74 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 6 | 35.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 7 | 35.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 8 | 35.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 18 | 36.18 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 21 | 36.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 22 | 36.29 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 24 | 36.29 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 29 | 36.30 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 35 | 36.32 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 36 | 36.35 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 47 | 36.50 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 48 | 36.51 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 94 | 36.61 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 95 | 36.61 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 104 | 36.70 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 105 | 36.71 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 110 | 36.78 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 111 | 36.78 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 112 | 36.79 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 115 | 36.80 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 5 | 10 |
| 117 | 36.81 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 118 | 36.81 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 130 | 36.83 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 151 | 36.84 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 168 | 36.88 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 172 | 36.90 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 186 | 36.94 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 10 | 21 |
| 191 | 36.95 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 192 | 36.95 | humidity | 90.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 207 | 36.96 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 212 | 36.97 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 214 | 36.97 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 218 | 36.97 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 224 | 36.98 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 230 | 36.98 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 235 | 36.99 | humidity | 70.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 242 | 36.99 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 249 | 36.99 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 253 | 37.00 | humidity | 90.0 | 720 | > th | dose independent | rect. | 3 | 1 |
| 257 | 37.00 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 260 | 37.00 | wind | 5.0 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 271 | 37.00 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 287 | 37.01 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 311 | 37.01 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 328 | 37.02 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 349 | 37.02 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 375 | 37.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 407 | 37.03 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 421 | 37.04 | humidity | 70.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 461 | 37.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 465 | 37.05 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 518 | 37.06 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 536 | 37.06 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 568 | 37.07 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 641 | 37.08 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 704 | 37.09 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 705 | 37.09 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 732 | 37.10 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 740 | 37.10 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 10 |
| 753 | 37.10 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 838 | 37.12 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |