Os05g0363600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0363600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.79 | 0.438 | 8.91 | 2.05 | 0.659 | -0.645 | -0.61 | -0.0279 | 0.478 | 0.654 | 79.16 | 1237 | -- | -- |
| 86.79 | 0.434 | 8.91 | 2.05 | 0.663 | -0.649 | -0.613 | -- | 0.48 | 0.644 | 79.35 | 1228 | -- | -- |
| 88.18 | 0.437 | 8.91 | 2.05 | 0.664 | -0.635 | -- | -0.295 | 0.476 | 0.39 | 79.26 | 1219 | -- | -- |
| 88.29 | 0.438 | 8.91 | 2.08 | 0.668 | -0.67 | -- | -- | 0.482 | 0.405 | 79 | 1222 | -- | -- |
| 102.49 | 0.474 | 8.89 | 2 | -- | -0.661 | -- | 1.52 | 0.496 | -- | 86.15 | 1636 | -- | -- |
| 96.15 | 0.46 | 8.9 | 1.94 | 0.547 | -- | -0.731 | -- | 0.505 | 0.681 | -- | -- | -- | -- |
| 98.26 | 0.464 | 8.9 | 1.96 | 0.55 | -- | -- | -- | 0.51 | 0.28 | -- | -- | -- | -- |
| 106.74 | 0.483 | 8.9 | 1.99 | -- | -0.621 | -- | -- | 0.497 | -- | 86.15 | 1636 | -- | -- |
| 145.29 | 0.561 | 8.99 | -- | 0.629 | -1.23 | -- | -- | 0.212 | 22.8 | 67 | 35815 | -- | -- |
| 117.25 | 0.506 | 8.89 | 1.98 | -- | -- | -- | -- | 0.519 | -- | -- | -- | -- | -- |
| 199.91 | 0.661 | 8.95 | -- | 0.578 | -- | -- | -- | 0.291 | 0.461 | -- | -- | -- | -- |
| 159.01 | 0.587 | 8.98 | -- | -- | -1.55 | -- | -- | 0.14 | -- | 68 | 47520 | -- | -- |
| 220.88 | 0.694 | 8.94 | -- | -- | -- | -- | -- | 0.299 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.49 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 14 |
| 14 | 84.93 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 22 |
| 21 | 85.30 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 23 | 85.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 22 |
| 28 | 85.46 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 31 | 85.51 | humidity | 80.0 | 270 | < th | dose independent | rect. | 14 | 3 |
| 32 | 85.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 33 | 85.55 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 40 | 85.63 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 44 | 85.67 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 45 | 85.67 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 46 | 85.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 52 | 85.77 | humidity | 90.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 65 | 85.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 73 | 86.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 74 | 86.07 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 9 |
| 77 | 86.10 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 19 |
| 82 | 86.14 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 99 | 86.27 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 3 |
| 100 | 86.28 | humidity | 80.0 | 270 | < th | dose independent | rect. | 15 | 1 |
| 105 | 86.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 114 | 86.36 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 15 |
| 115 | 86.37 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 119 | 86.38 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 123 | 86.40 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 19 |
| 129 | 86.42 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 13 |
| 139 | 86.46 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 141 | 86.47 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 145 | 86.49 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 148 | 86.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 150 | 86.52 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 161 | 86.59 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 164 | 86.61 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 178 | 86.63 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 184 | 86.65 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 185 | 86.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 186 | 86.65 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 193 | 86.67 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 198 | 86.70 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 19 | 9 |
| 200 | 86.71 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 13 |
| 215 | 86.74 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 11 |
| 216 | 86.74 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 219 | 86.75 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 235 | 86.80 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 236 | 86.80 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 238 | 86.80 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 239 | 86.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 245 | 86.80 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 246 | 86.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 247 | 86.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 252 | 86.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 253 | 86.81 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 274 | 86.89 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 278 | 86.89 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 9 | 17 |
| 279 | 86.89 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 284 | 86.90 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 3 |
| 320 | 86.94 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 332 | 86.98 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 22 |
| 342 | 87.00 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 359 | 87.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 366 | 87.06 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 373 | 87.07 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 376 | 87.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 391 | 87.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 396 | 87.10 | wind | 1.0 | 90 | > th | dose dependent | rect. | 15 | 4 |
| 442 | 87.16 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 466 | 87.19 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 17 |
| 469 | 87.19 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 482 | 87.21 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 487 | 87.22 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 492 | 87.22 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 500 | 87.24 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 525 | 87.28 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 536 | 87.30 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 545 | 87.32 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 7 |
| 554 | 87.34 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 3 |
| 559 | 87.34 | wind | 9.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 567 | 87.36 | radiation | 30.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 581 | 87.37 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 585 | 87.38 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 590 | 87.40 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 612 | 87.43 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 622 | 87.45 | radiation | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 630 | 87.45 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 631 | 87.46 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 643 | 87.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 651 | 87.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 669 | 87.49 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 700 | 87.53 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 717 | 87.55 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 6 | 3 |
| 718 | 87.55 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 736 | 87.57 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 7 |
| 737 | 87.57 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 7 |
| 739 | 87.57 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 740 | 87.57 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 7 |
| 742 | 87.57 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 744 | 87.57 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 757 | 87.59 | temperature | 20.0 | 270 | > th | dose independent | sin | 0 | NA |
| 764 | 87.60 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 768 | 87.60 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 773 | 87.61 | wind | 3.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 785 | 87.62 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 2 |
| 800 | 87.63 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 812 | 87.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 827 | 87.64 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 834 | 87.65 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 848 | 87.67 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 859 | 87.67 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 871 | 87.68 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 883 | 87.70 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 887 | 87.70 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 927 | 87.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 932 | 87.72 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 948 | 87.73 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 959 | 87.74 | radiation | 40.0 | 30 | < th | dose independent | rect. | 16 | 17 |
| 989 | 87.77 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 4 |