Os05g0361000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os05g0361000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.78 | 0.723 | 7.22 | -0.0314 | 2.46 | 2.98 | -3.06 | -3.64 | -0.99 | 14.4 | 15.71 | 97 | 3.1 | -- |
| 243.15 | 0.726 | 7.16 | 0.402 | 2.84 | 3.35 | -1.74 | -- | -0.858 | 13.9 | 14.84 | 178 | 4.19 | -- |
| 253.59 | 0.742 | 7.18 | 0.491 | 3.73 | 4.14 | -- | 1.6 | -0.824 | 13.9 | 11.44 | 137 | 4.26 | -- |
| 254.75 | 0.743 | 7.17 | 0.331 | 3.07 | 3.59 | -- | -- | -0.882 | 13.8 | 14.39 | 204 | 4.51 | -- |
| 290.32 | 0.794 | 7.16 | 0.24 | -- | 2.11 | -- | -2.4 | -0.689 | -- | -168.6 | 1390 | 5.78 | -- |
| 327.62 | 0.849 | 7.05 | 0.916 | 1.14 | -- | -2.16 | -- | -0.418 | 11.3 | -- | -- | -- | -- |
| 347.45 | 0.873 | 7.05 | 0.826 | 1.16 | -- | -- | -- | -0.427 | 11.1 | -- | -- | -- | -- |
| 303.77 | 0.812 | 7.16 | 0.339 | -- | 2.66 | -- | -- | -0.765 | -- | -172.7 | 1402 | 6.25 | -- |
| 257.56 | 0.747 | 7.18 | -- | 3.2 | 3.77 | -- | -- | -0.933 | 14 | 14.2 | 211 | 4.51 | -- |
| 430.62 | 0.97 | 7.08 | 0.799 | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
| 365.43 | 0.894 | 7.07 | -- | 1.15 | -- | -- | -- | -0.519 | 11 | -- | -- | -- | -- |
| 306.29 | 0.815 | 7.17 | -- | -- | 2.79 | -- | -- | -0.828 | -- | -172.8 | 1405 | 6.26 | -- |
| 447.47 | 0.987 | 7.1 | -- | -- | -- | -- | -- | -0.525 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 2 | 225.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 4 | 227.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 11 | 229.57 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 12 | 229.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 15 | 230.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 25 | 231.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 41 | 232.83 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 81 | 237.49 | temperature | 15 | 90 | > th | dose dependent | sin | 9 | NA |
| 86 | 237.84 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 93 | 238.32 | temperature | 15 | 270 | > th | dose dependent | sin | 11 | NA |
| 118 | 239.08 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 18 |
| 128 | 239.57 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 234 | 244.48 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 270 | 246.00 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 292 | 246.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 296 | 246.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 300 | 247.00 | temperature | 20 | 10 | > th | dose independent | sin | 8 | NA |
| 350 | 249.41 | temperature | 20 | 90 | > th | dose independent | sin | 9 | NA |
| 358 | 249.62 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 9 |
| 360 | 249.68 | temperature | 20 | 10 | < th | dose independent | sin | 8 | NA |
| 379 | 250.40 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 382 | 250.42 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 13 |
| 388 | 250.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 392 | 250.71 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 485 | 253.23 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 17 |
| 489 | 253.36 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 10 |
| 502 | 253.56 | temperature | 20 | 270 | < th | dose independent | rect. | 16 | 15 |
| 534 | 254.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 553 | 254.28 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 20 |
| 654 | 255.82 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 661 | 255.94 | temperature | 20 | 10 | < th | dose independent | rect. | 14 | 19 |
| 677 | 256.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 686 | 256.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 691 | 256.45 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 21 |
| 697 | 256.54 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 708 | 256.65 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 721 | 256.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 723 | 256.87 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 724 | 256.87 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 738 | 257.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 740 | 257.05 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 749 | 257.17 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 856 | 258.58 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 12 |
| 948 | 259.59 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 990 | 260.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |