Os05g0360900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os05g0360900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.11 | 0.5 | 3.12 | 0.162 | 0.0596 | 0.523 | -0.226 | 1.97 | 0.114 | 4.75 | 1002 | 5509 | -- | -- |
| 114.76 | 0.499 | 3.14 | 0.0671 | 0.0691 | 0.659 | -0.182 | -- | 0.121 | 4.51 | 999.5 | 11729 | -- | -- |
| 113.22 | 0.496 | 3.12 | 0.169 | 0.0563 | 0.531 | -- | 1.98 | 0.118 | 4.89 | 1003 | 5580 | -- | -- |
| 114.84 | 0.499 | 3.14 | 0.0609 | 0.0704 | 0.663 | -- | -- | 0.124 | 5.38 | 999.6 | 11747 | -- | -- |
| 113.41 | 0.496 | 3.12 | 0.17 | -- | 0.522 | -- | 2 | 0.119 | -- | 1003 | 5578 | -- | -- |
| 125.76 | 0.526 | 3.15 | 0.196 | 0.0631 | -- | -0.192 | -- | 0.0623 | 4.96 | -- | -- | -- | -- |
| 125.84 | 0.525 | 3.15 | 0.196 | 0.0644 | -- | -- | -- | 0.0634 | 5.86 | -- | -- | -- | -- |
| 115.1 | 0.5 | 3.14 | 0.0635 | -- | 0.661 | -- | -- | 0.127 | -- | 999.6 | 11730 | -- | -- |
| 114.94 | 0.499 | 3.14 | -- | 0.0719 | 0.676 | -- | -- | 0.12 | 5.34 | 999.7 | 11750 | -- | -- |
| 126.05 | 0.525 | 3.15 | 0.198 | -- | -- | -- | -- | 0.0649 | -- | -- | -- | -- | -- |
| 126.86 | 0.527 | 3.16 | -- | 0.0675 | -- | -- | -- | 0.0415 | 5.72 | -- | -- | -- | -- |
| 115.21 | 0.5 | 3.14 | -- | -- | 0.675 | -- | -- | 0.121 | -- | 999.7 | 11739 | -- | -- |
| 127.09 | 0.526 | 3.16 | -- | -- | -- | -- | -- | 0.0429 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.90 | humidity | 90 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 3 | 107.19 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 4 | 107.46 | humidity | 90 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 9 | 108.02 | humidity | 80 | 270 | < th | dose independent | rect. | 1 | 3 |
| 12 | 108.30 | humidity | 80 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 15 | 108.35 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 16 | 108.45 | humidity | 80 | 10 | < th | dose independent | rect. | 2 | 4 |
| 22 | 108.65 | humidity | 80 | 270 | < th | dose independent | rect. | 2 | 1 |
| 35 | 108.80 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 7 |
| 64 | 109.49 | humidity | 90 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 66 | 109.51 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 68 | 109.55 | humidity | 70 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 88 | 110.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 90 | 110.04 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 92 | 110.06 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 2 |
| 105 | 110.21 | wind | 7 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 108 | 110.23 | humidity | 90 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 119 | 110.37 | humidity | 90 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 120 | 110.37 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 126 | 110.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 130 | 110.50 | temperature | 25 | 90 | > th | dose dependent | rect. | 2 | 2 |
| 131 | 110.50 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 132 | 110.51 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 3 |
| 141 | 110.57 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 11 |
| 142 | 110.59 | radiation | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 168 | 110.73 | humidity | 70 | 1440 | > th | dose dependent | rect. | 24 | 6 |
| 196 | 110.93 | wind | 7 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 207 | 111.04 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 3 |
| 245 | 111.34 | humidity | 80 | 10 | < th | dose independent | rect. | 24 | 7 |
| 258 | 111.40 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 276 | 111.51 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 278 | 111.52 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 284 | 111.57 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 293 | 111.59 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 302 | 111.63 | humidity | 90 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 315 | 111.68 | wind | 5 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 316 | 111.69 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 320 | 111.69 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 327 | 111.71 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 331 | 111.72 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 338 | 111.72 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 361 | 111.82 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 374 | 111.88 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 384 | 111.90 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 428 | 112.05 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 11 |
| 468 | 112.08 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 522 | 112.25 | humidity | 80 | 10 | < th | dose independent | rect. | 22 | 9 |
| 532 | 112.29 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 1 |
| 657 | 112.50 | humidity | 80 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 708 | 112.65 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 8 |
| 782 | 112.94 | wind | 7 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 826 | 113.15 | humidity | 90 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 851 | 113.21 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 9 |
| 897 | 113.39 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 899 | 113.41 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 901 | 113.42 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 905 | 113.43 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 906 | 113.43 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 909 | 113.44 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 914 | 113.44 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 919 | 113.44 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 935 | 113.45 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 969 | 113.49 | atmosphere | 995 | 14400 | > th | dose independent | sin | 4 | NA |
| 980 | 113.50 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 3 | 14 |
| 986 | 113.52 | atmosphere | 995 | 14400 | < th | dose independent | sin | 4 | NA |