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Os05g0359700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.041) R2 : 0.854
β1 : 0.892 (0.15) R2dD : 0.0116 R2D : -0.00362
β2 : 3.7 (0.117) R2dC : 0.42 R2C : 0.664
β3 : -3.58 (0.184) R2dE : 0.173 R2E : 0.425
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.291 (0.0896) R2dN8 : 0.00591 R2N8 : 0.0103
σ : 0.764
deviance : 268.83
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C
peak time of C : 15.4
E
wheather : temperature
threshold : 24.3
memory length : 95
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.1
open length of G : 2.12

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
253.8 0.749 11.2 0.791 3.69 -3.31 -0.756 -4.88 0.372 15.4 24.4 96 3.1 2.11
269.84 0.765 11.1 0.886 3.62 -3.72 -0.18 -- 0.402 15.4 24.3 94 3.09 2.08
255.18 0.744 11.2 0.794 3.7 -3.32 -- -4.17 0.368 15.4 24.4 95 3.1 2.11
268.83 0.764 11.2 0.892 3.7 -3.58 -- -- 0.291 15.4 24.3 95 3.1 2.12
790.04 1.31 11.1 0.813 -- -4.04 -- -2.94 0.555 -- 40.75 31 2.7 3.2
472.79 1.02 11.1 0.703 4.89 -- 1.87 -- 0.733 15.8 -- -- -- --
482.97 1.03 11.1 0.73 4.89 -- -- -- 0.744 15.8 -- -- -- --
798.1 1.32 11 1.04 -- -4.44 -- -- 0.816 -- 52.94 121 2.22 3.37
289.83 0.793 11.2 -- 3.68 -3.6 -- -- 0.245 15.4 24.3 95 3.09 2.08
1803.41 1.98 11.1 0.527 -- -- -- -- 0.613 -- -- -- -- --
497 1.04 11.1 -- 4.88 -- -- -- 0.662 15.8 -- -- -- --
675.13 1.21 11 -- -- -4.22 -- -- 0.736 -- 156.8 314 0.0166 3.53
1810.73 1.99 11.1 -- -- -- -- -- 0.555 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 271.44 temperature 25.0 90 < th dose independent rect. 3 2
2 275.22 wind 3.0 10 < th dose dependent rect. 3 3
3 277.02 wind 3.0 90 < th dose dependent rect. 3 2
6 280.58 temperature 25.0 270 < th dose independent rect. 1 2
16 293.18 precipitation 0.1 90 < th dose independent rect. 3 2
17 293.18 precipitation 0.1 90 < th dose dependent rect. 3 2
18 293.97 precipitation 0.1 10 < th dose independent rect. 3 3
19 293.97 precipitation 0.1 10 < th dose dependent rect. 3 3
22 294.57 temperature 30.0 720 > th dose dependent rect. 18 1
40 298.10 wind 5.0 90 < th dose independent rect. 3 2
44 298.89 wind 5.0 10 < th dose independent rect. 3 3
46 300.06 temperature 10.0 10 > th dose dependent rect. 3 3
48 300.73 humidity 90.0 90 > th dose dependent rect. 3 2
49 300.78 wind 9.0 90 < th dose independent rect. 5 22
52 301.13 radiation 1.0 90 < th dose independent rect. 3 2
55 301.16 temperature 10.0 90 > th dose independent rect. 3 2
58 301.16 humidity 50.0 90 > th dose independent rect. 3 2
61 301.16 atmosphere 995.0 90 > th dose independent rect. 3 2
62 301.16 atmosphere 1010.0 90 < th dose independent rect. 3 2
67 301.16 temperature 10.0 90 > th dose independent rect. 5 22
68 301.21 radiation 40.0 90 < th dose dependent rect. 3 2
75 302.03 humidity 50.0 90 > th dose dependent rect. 3 2
76 302.06 temperature 20.0 10 > th dose independent rect. 6 21
77 302.31 temperature 10.0 10 > th dose dependent rect. 6 21
79 302.44 radiation 10.0 10 < th dose independent rect. 3 3
80 302.60 wind 9.0 10 < th dose independent rect. 6 21
84 303.05 atmosphere 1005.0 10 > th dose independent rect. 3 3
86 303.08 temperature 10.0 10 > th dose independent rect. 3 3
88 303.08 temperature 30.0 10 < th dose independent rect. 3 3
89 303.08 humidity 50.0 10 > th dose independent rect. 3 3
92 303.08 atmosphere 995.0 10 > th dose independent rect. 3 3
93 303.08 atmosphere 1010.0 10 < th dose independent rect. 3 3
108 304.59 precipitation 0.1 10 < th dose independent rect. 6 21
109 304.59 precipitation 0.1 10 < th dose dependent rect. 6 21
131 305.85 wind 5.0 270 < th dose independent rect. 1 2
158 306.95 humidity 50.0 10 > th dose dependent rect. 3 3
160 307.13 radiation 40.0 10 < th dose dependent rect. 3 3
166 308.09 humidity 50.0 1440 < th dose independent rect. 16 1
170 308.52 wind 1.0 270 > th dose independent rect. 1 2
179 309.34 precipitation 0.1 270 < th dose independent rect. 1 3
180 309.34 precipitation 0.1 270 < th dose dependent rect. 1 3
181 309.59 humidity 50.0 1440 < th dose dependent rect. 16 1
191 310.28 humidity 90.0 90 > th dose independent rect. 3 2
205 311.86 atmosphere 1015.0 90 < th dose dependent rect. 3 2
239 314.10 humidity 80.0 720 < th dose dependent rect. 19 3
243 314.19 humidity 60.0 14400 > th dose independent rect. 3 4
268 315.09 wind 9.0 270 < th dose independent rect. 3 22
269 315.10 temperature 10.0 270 > th dose independent rect. 1 2
272 315.10 humidity 50.0 270 > th dose independent rect. 1 2
275 315.10 atmosphere 995.0 270 > th dose independent rect. 1 2
276 315.10 atmosphere 1010.0 270 < th dose independent rect. 1 2
278 315.10 radiation 1.0 270 < th dose independent rect. 1 2
284 315.10 temperature 10.0 270 > th dose independent rect. 3 22
285 315.10 radiation 1.0 270 < th dose dependent rect. 1 2
302 316.19 atmosphere 1015.0 10 < th dose independent rect. 6 21
313 317.14 temperature 30.0 90 < th dose dependent rect. 3 2
398 319.50 atmosphere 995.0 10 > th dose dependent rect. 3 3
404 320.00 atmosphere 995.0 10 > th dose independent rect. 6 21
413 320.95 temperature 20.0 270 > th dose independent rect. 15 9
414 320.96 atmosphere 995.0 90 > th dose dependent rect. 3 2
416 321.40 humidity 50.0 270 > th dose dependent rect. 1 2
419 321.64 radiation 30.0 1440 < th dose independent rect. 3 4
420 321.65 humidity 70.0 1440 > th dose independent rect. 3 4
421 321.70 wind 9.0 1440 < th dose independent rect. 3 4
422 321.70 temperature 10.0 1440 > th dose independent rect. 3 4
425 321.70 temperature 30.0 1440 < th dose independent rect. 3 4
429 321.70 humidity 50.0 1440 > th dose independent rect. 3 4
434 321.70 atmosphere 995.0 1440 > th dose independent rect. 3 4
439 321.70 temperature 10.0 1440 > th dose independent rect. 7 20
482 324.19 atmosphere 1015.0 1440 < th dose independent rect. 3 4
516 326.11 radiation 40.0 90 < th dose dependent rect. 6 21
523 326.58 atmosphere 1005.0 270 > th dose independent rect. 1 2
560 329.18 precipitation 0.1 270 < th dose independent rect. 24 14
561 329.18 precipitation 0.1 270 < th dose dependent rect. 24 14
701 333.33 atmosphere 1015.0 10 < th dose dependent rect. 3 3
801 334.23 radiation 40.0 90 < th dose independent rect. 6 20
813 334.86 humidity 50.0 720 > th dose dependent rect. 19 6
816 334.98 humidity 80.0 720 > th dose independent rect. 20 3
829 335.43 humidity 80.0 720 > th dose independent rect. 21 1
861 336.51 temperature 10.0 270 > th dose dependent rect. 16 8
901 337.36 humidity 50.0 10 > th dose independent rect. 6 21
908 337.51 wind 1.0 270 > th dose independent rect. 4 20
933 338.28 wind 9.0 30 < th dose dependent rect. 6 21
936 338.43 humidity 50.0 1440 > th dose independent rect. 16 1
943 338.83 atmosphere 1015.0 270 < th dose dependent rect. 1 2
947 339.00 humidity 70.0 720 > th dose independent rect. 19 7
979 339.51 atmosphere 995.0 270 > th dose independent rect. 24 15