Os05g0355100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os05g0355100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.52 | 0.344 | 3.25 | 0.32 | 0.225 | -0.228 | -0.0768 | -1.17 | 0.0137 | 7 | 68.02 | 5748 | -- | -- |
| 55.47 | 0.347 | 3.24 | 0.188 | 0.236 | -0.263 | -0.0607 | -- | -0.0171 | 6.7 | 79.25 | 7246 | -- | -- |
| 53.5 | 0.341 | 3.25 | 0.329 | 0.229 | -0.223 | -- | -1.19 | 0.014 | 6.95 | 70 | 5842 | -- | -- |
| 55.46 | 0.347 | 3.24 | 0.175 | 0.229 | -0.276 | -- | -- | -0.0327 | 6.94 | 79 | 7245 | -- | -- |
| 56.19 | 0.349 | 3.25 | 0.332 | -- | -0.235 | -- | -1.16 | 0.0126 | -- | 69.73 | 5734 | -- | -- |
| 56.78 | 0.353 | 3.22 | 0.13 | 0.228 | -- | -0.0851 | -- | 0.0648 | 6.86 | -- | -- | -- | -- |
| 56.8 | 0.353 | 3.22 | 0.129 | 0.228 | -- | -- | -- | 0.0651 | 6.92 | -- | -- | -- | -- |
| 58.16 | 0.355 | 3.24 | 0.181 | -- | -0.28 | -- | -- | -0.0291 | -- | 79 | 7121 | -- | -- |
| 56.23 | 0.349 | 3.24 | -- | 0.231 | -0.234 | -- | -- | -0.0378 | 6.87 | 77.14 | 7247 | -- | -- |
| 59.52 | 0.36 | 3.22 | 0.134 | -- | -- | -- | -- | 0.0693 | -- | -- | -- | -- | -- |
| 57.24 | 0.354 | 3.22 | -- | 0.229 | -- | -- | -- | 0.0507 | 6.88 | -- | -- | -- | -- |
| 58.98 | 0.358 | 3.25 | -- | -- | -0.237 | -- | -- | -0.0369 | -- | 76.74 | 7125 | -- | -- |
| 59.99 | 0.362 | 3.23 | -- | -- | -- | -- | -- | 0.0545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.80 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 4 | 52.17 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 6 | 52.55 | wind | 1 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 7 | 52.75 | humidity | 90 | 10 | < th | dose independent | rect. | 4 | 1 |
| 9 | 52.86 | temperature | 25 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 53.00 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 6 | 1 |
| 12 | 53.01 | radiation | 10 | 30 | < th | dose independent | rect. | 6 | 1 |
| 14 | 53.15 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 16 | 53.18 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 3 |
| 17 | 53.18 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 18 | 53.19 | temperature | 25 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 25 | 53.34 | wind | 1 | 30 | > th | dose dependent | rect. | 6 | 1 |
| 29 | 53.37 | temperature | 25 | 90 | > th | dose independent | rect. | 1 | 6 |
| 30 | 53.45 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 2 |
| 34 | 53.48 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 42 | 53.60 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 43 | 53.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 44 | 53.61 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 59 | 53.63 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 60 | 53.63 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 63 | 53.65 | wind | 5 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 80 | 53.68 | wind | 3 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 83 | 53.69 | temperature | 25 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 85 | 53.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 95 | 53.74 | temperature | 25 | 720 | > th | dose independent | rect. | 1 | 1 |
| 118 | 53.76 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 119 | 53.76 | atmosphere | 995 | 30 | > th | dose independent | rect. | 7 | 23 |
| 122 | 53.77 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 143 | 53.79 | wind | 3 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 155 | 53.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 22 |
| 190 | 53.81 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 229 | 53.83 | temperature | 30 | 14400 | < th | dose independent | sin | 17 | NA |
| 313 | 53.84 | temperature | 30 | 14400 | > th | dose independent | sin | 17 | NA |
| 341 | 53.84 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 407 | 53.86 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 466 | 53.86 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 469 | 53.87 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 471 | 53.87 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 472 | 53.87 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 1 |
| 693 | 53.89 | radiation | 20 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 697 | 53.90 | humidity | 90 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 715 | 53.90 | radiation | 1 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 738 | 53.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 744 | 53.93 | humidity | 90 | 1440 | > th | dose independent | rect. | 2 | 3 |
| 769 | 53.96 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 775 | 53.97 | humidity | 90 | 10 | < th | dose independent | rect. | 2 | 6 |
| 777 | 53.97 | humidity | 80 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 803 | 53.99 | wind | 1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 812 | 54.00 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 828 | 54.01 | humidity | 80 | 14400 | < th | dose dependent | sin | 8 | NA |
| 830 | 54.01 | humidity | 80 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 886 | 54.03 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 889 | 54.03 | temperature | 25 | 14400 | > th | dose dependent | sin | 3 | NA |
| 893 | 54.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 996 | 54.06 | temperature | 30 | 14400 | > th | dose dependent | sin | 16 | NA |