Os05g0352800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0352800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.8 | 0.209 | 10.6 | -0.0149 | 0.437 | -0.357 | -0.718 | -0.215 | -0.0427 | 14.2 | 71 | 1419 | -- | -- |
| 19.91 | 0.208 | 10.6 | -0.0387 | 0.438 | -0.373 | -0.715 | -- | -0.0548 | 14.2 | 72 | 1416 | -- | -- |
| 21.68 | 0.217 | 10.6 | -0.037 | 0.438 | -0.372 | -- | -0.238 | -0.0482 | 14.4 | 71 | 1411 | -- | -- |
| 21.79 | 0.217 | 10.6 | -0.0769 | 0.441 | -0.387 | -- | -- | -0.0583 | 14.4 | 71.97 | 1416 | -- | -- |
| 27.67 | 0.246 | 10.6 | -0.0541 | -- | -0.307 | -- | 0.308 | -0.0116 | -- | 77 | 3155 | -- | -- |
| 25.21 | 0.235 | 10.6 | 0.0281 | 0.424 | -- | -0.813 | -- | 0.00475 | 14.1 | -- | -- | -- | -- |
| 27.67 | 0.246 | 10.6 | 0.0045 | 0.426 | -- | -- | -- | 0.000361 | 14.3 | -- | -- | -- | -- |
| 27.77 | 0.247 | 10.6 | -0.0454 | -- | -0.316 | -- | -- | -0.0143 | -- | 75 | 3136 | -- | -- |
| 21.93 | 0.218 | 10.6 | -- | 0.438 | -0.376 | -- | -- | -0.0512 | 14.4 | 71.81 | 1416 | -- | -- |
| 38.42 | 0.29 | 10.6 | -0.0134 | -- | -- | -- | -- | -0.01 | -- | -- | -- | -- | -- |
| 27.67 | 0.246 | 10.6 | -- | 0.425 | -- | -- | -- | -0.00014 | 14.3 | -- | -- | -- | -- |
| 27.54 | 0.245 | 10.6 | -- | -- | -0.32 | -- | -- | -0.0148 | -- | 75 | 1707 | -- | -- |
| 38.42 | 0.289 | 10.6 | -- | -- | -- | -- | -- | -0.00853 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.72 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 2 | 19.74 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 6 | 19.79 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 18 | 19.87 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 25 | 19.90 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 28 | 19.90 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 42 | 19.94 | humidity | 70 | 1440 | > th | dose independent | sin | 18 | NA |
| 77 | 19.98 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 96 | 19.99 | humidity | 60 | 1440 | > th | dose dependent | sin | 22 | NA |
| 123 | 20.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 126 | 20.02 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 166 | 20.03 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 364 | 20.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 386 | 20.20 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 498 | 20.28 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 512 | 20.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 675 | 20.35 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 709 | 20.37 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 858 | 20.39 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 885 | 20.40 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 898 | 20.41 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 3 |