FiT-DB / Search/ Help/ Sample detail

Os05g0337500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.83 (0.0223) R2 : 0.618
β1 : -1.24 (0.0815) R2dD : 0.202 R2D : 0.19
β2 : 1.21 (0.0537) R2dC : 0.427 R2C : 0.419
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0294 (0.0475) R2dN8 : 0.000431 R2N8 : -0.00502
σ : 0.419
deviance : 79.93
__
_____
C
peak time of C : 22.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.72 0.395 9.8 -1.22 1.21 0.224 -0.633 3.04 -0.00102 22.2 1003 28 -- --
71.33 0.396 9.82 -1.34 1.21 0.73 -0.666 -- 0.00788 22.3 1003 11 -- --
72.26 0.399 9.8 -1.19 1.21 0.199 -- 3.25 0.000292 22.2 1003 13 -- --
73.09 0.401 9.82 -1.32 1.22 0.727 -- -- 0.00956 22.2 1003 9 -- --
160.73 0.594 9.75 -1.09 -- -0.192 -- 5.32 -0.00587 -- 1003 13 -- --
78.22 0.415 9.83 -1.27 1.21 -- -0.654 -- -0.0312 22.2 -- -- -- --
79.93 0.419 9.83 -1.24 1.21 -- -- -- -0.0294 22.2 -- -- -- --
160.14 0.589 9.78 -1.29 -- 0.739 -- -- 0.0413 -- 1004 700 -- --
117.83 0.508 9.79 -- 1.21 0.43 -- -- 0.147 22.2 1004 11 -- --
168.85 0.607 9.79 -1.23 -- -- -- -- -0.027 -- -- -- -- --
120.68 0.514 9.79 -- 1.2 -- -- -- 0.109 22.1 -- -- -- --
202.87 0.663 9.74 -- -- 0.602 -- -- 0.231 -- 1010 448 -- --
208.5 0.674 9.76 -- -- -- -- -- 0.109 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.89 humidity 80 14400 < th dose independent rect. 20 11
2 62.04 humidity 80 14400 > th dose independent rect. 21 10
4 62.15 humidity 80 14400 < th dose independent rect. 21 8
8 62.23 humidity 80 14400 < th dose dependent rect. 21 10
10 62.26 humidity 90 14400 < th dose dependent rect. 1 6
12 62.30 humidity 80 14400 < th dose dependent rect. 21 5
36 62.63 temperature 30 43200 > th dose dependent rect. 8 1
51 62.67 humidity 80 14400 < th dose independent rect. 22 3
58 62.74 humidity 80 14400 < th dose dependent rect. 1 1
64 62.78 humidity 80 14400 < th dose dependent rect. 22 1
79 62.86 wind 1 43200 < th dose dependent rect. 10 2
97 62.93 temperature 30 43200 > th dose independent rect. 8 1
136 63.12 humidity 80 14400 > th dose independent rect. 24 1
137 63.12 temperature 30 43200 < th dose independent rect. 5 4
138 63.12 temperature 30 43200 < th dose independent rect. 21 12
151 63.18 temperature 30 43200 < th dose independent rect. 8 1
155 63.19 temperature 30 43200 < th dose independent rect. 1 8
164 63.24 wind 1 43200 < th dose independent rect. 10 2
185 63.49 wind 1 43200 > th dose independent rect. 11 1
216 63.80 humidity 80 14400 > th dose independent rect. 5 1
218 63.80 wind 1 43200 < th dose independent rect. 9 4
220 63.82 humidity 80 14400 > th dose independent rect. 3 4
221 63.83 humidity 80 14400 < th dose independent rect. 3 4
264 64.07 wind 9 14400 > th dose dependent rect. 20 18
281 64.28 wind 9 14400 > th dose independent rect. 20 18
288 64.42 wind 9 14400 < th dose independent rect. 12 3
289 64.44 wind 9 14400 < th dose independent rect. 20 18
307 64.68 wind 7 14400 > th dose dependent rect. 15 1
328 64.86 wind 9 14400 < th dose independent rect. 20 20
338 65.04 wind 9 14400 < th dose independent rect. 5 10
341 65.09 wind 7 14400 > th dose dependent rect. 12 2
342 65.10 wind 7 14400 > th dose dependent rect. 12 5
347 65.12 humidity 70 14400 > th dose dependent rect. 4 1
348 65.12 wind 3 43200 < th dose dependent rect. 21 2
356 65.17 wind 9 14400 < th dose independent rect. 10 5
393 65.36 wind 9 14400 < th dose independent rect. 1 14
438 65.53 wind 9 14400 < th dose independent sin 0 NA
452 65.59 wind 7 14400 > th dose dependent rect. 5 12
458 65.63 wind 1 43200 < th dose independent rect. 2 1
480 65.69 humidity 80 43200 > th dose independent rect. 17 6
481 65.70 radiation 10 43200 > th dose independent rect. 17 1
503 65.74 wind 1 43200 < th dose dependent rect. 20 6
510 65.76 wind 1 43200 < th dose dependent rect. 18 8
515 65.79 radiation 40 43200 > th dose independent rect. 12 1
517 65.79 wind 9 14400 > th dose dependent sin 22 NA
522 65.80 wind 9 14400 > th dose independent sin 23 NA
523 65.80 radiation 40 43200 < th dose independent rect. 12 1
532 65.83 humidity 80 43200 > th dose independent rect. 17 12
537 65.85 wind 9 14400 > th dose independent rect. 5 16
539 65.86 wind 9 14400 > th dose independent rect. 10 11
553 65.87 wind 7 14400 > th dose dependent sin 1 NA
557 65.88 humidity 80 43200 < th dose independent rect. 16 14
575 65.93 wind 9 14400 > th dose independent rect. 13 2
579 65.93 wind 9 14400 > th dose dependent rect. 15 23
588 65.95 radiation 40 43200 > th dose independent rect. 11 3
590 65.95 wind 9 14400 > th dose independent rect. 15 23
611 65.98 wind 9 14400 > th dose dependent rect. 4 17
616 65.99 wind 1 43200 < th dose independent rect. 20 6
633 66.02 wind 9 14400 < th dose independent rect. 5 16
647 66.04 humidity 50 14400 > th dose dependent rect. 3 4
666 66.06 wind 1 43200 < th dose independent rect. 18 8
690 66.07 humidity 80 43200 < th dose independent rect. 17 6
719 66.10 wind 9 14400 < th dose independent rect. 10 11
748 66.13 wind 9 14400 > th dose independent rect. 12 9
755 66.14 wind 1 43200 > th dose independent rect. 2 1
799 66.19 wind 9 14400 > th dose dependent rect. 12 23
803 66.20 radiation 10 43200 > th dose independent rect. 16 15
821 66.21 wind 9 14400 > th dose independent rect. 10 8
824 66.21 wind 9 14400 > th dose independent rect. 5 13
831 66.21 humidity 60 14400 > th dose dependent rect. 1 4
834 66.21 wind 1 14400 > th dose dependent rect. 1 16
839 66.22 wind 9 14400 > th dose independent rect. 10 5
840 66.22 wind 9 14400 > th dose independent rect. 13 5
855 66.24 wind 9 14400 > th dose independent rect. 6 9
862 66.24 wind 1 43200 < th dose dependent rect. 23 2
874 66.25 wind 9 14400 > th dose independent rect. 10 19
876 66.25 wind 9 14400 > th dose independent rect. 10 21
878 66.25 wind 9 14400 > th dose independent rect. 12 23
896 66.26 wind 1 14400 > th dose dependent rect. 3 13
979 66.29 wind 9 14400 > th dose dependent rect. 10 20