Os05g0337400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os05g0337400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.49 | 0.394 | 14.7 | -0.6 | 1.53 | -1.86 | 0.134 | -5.37 | -0.808 | 21.4 | 0.7901 | 1433 | -- | -- |
| 78.07 | 0.412 | 14.8 | -1.05 | 1.65 | -0.866 | 0.221 | -- | -0.907 | 22.1 | 22.76 | 1751 | -- | -- |
| 70.5 | 0.391 | 14.7 | -0.605 | 1.51 | -1.86 | -- | -5.38 | -0.808 | 21.4 | 0.79 | 1429 | -- | -- |
| 77.89 | 0.411 | 14.8 | -1.06 | 1.58 | -0.793 | -- | -- | -0.936 | 22 | 35.94 | 1786 | -- | -- |
| 123.77 | 0.518 | 14.6 | -0.697 | -- | -2.86 | -- | -6.31 | -0.641 | -- | 0.44 | 2518 | -- | -- |
| 90.17 | 0.445 | 14.8 | -0.974 | 1.56 | -- | 0.294 | -- | -0.791 | 21.5 | -- | -- | -- | -- |
| 90.49 | 0.445 | 14.8 | -0.984 | 1.56 | -- | -- | -- | -0.792 | 21.5 | -- | -- | -- | -- |
| 122.21 | 0.515 | 14.7 | -1.02 | -- | -2.37 | -- | -- | -0.655 | -- | 2.66 | 2502 | -- | -- |
| 106.88 | 0.482 | 14.8 | -- | 1.57 | -0.699 | -- | -- | -0.801 | 21.9 | 50 | 1791 | -- | -- |
| 233.75 | 0.714 | 14.7 | -0.974 | -- | -- | -- | -- | -0.796 | -- | -- | -- | -- | -- |
| 116.03 | 0.504 | 14.7 | -- | 1.56 | -- | -- | -- | -0.682 | 21.5 | -- | -- | -- | -- |
| 128.23 | 0.527 | 14.8 | -- | -- | -2.13 | -- | -- | -0.736 | -- | 6.723 | 1104 | -- | -- |
| 258.76 | 0.751 | 14.7 | -- | -- | -- | -- | -- | -0.688 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 67.69 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 14 | 68.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 17 | 68.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 20 | 68.92 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 33 | 69.25 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 63 | 69.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 70 | 69.75 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 21 |
| 77 | 69.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 80 | 69.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 21 |
| 85 | 69.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 96 | 69.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 97 | 69.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 18 |
| 115 | 69.96 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 134 | 70.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 148 | 70.08 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 164 | 70.13 | humidity | 80.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 235 | 70.35 | humidity | 80.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 255 | 70.40 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 261 | 70.41 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 298 | 70.49 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 320 | 70.57 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 327 | 70.58 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 340 | 70.62 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 343 | 70.63 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 350 | 70.64 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 357 | 70.65 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 369 | 70.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 398 | 70.72 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 403 | 70.73 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 415 | 70.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 490 | 70.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 508 | 70.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 513 | 70.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 519 | 70.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 521 | 70.88 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 526 | 70.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 532 | 70.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 611 | 70.96 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 17 | NA |
| 615 | 70.96 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 621 | 70.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 623 | 70.97 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 17 | NA |
| 628 | 70.97 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 17 | NA |
| 645 | 70.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 652 | 70.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 653 | 70.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 776 | 71.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 785 | 71.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 817 | 71.15 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 842 | 71.17 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 843 | 71.17 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 851 | 71.17 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 862 | 71.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 893 | 71.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 899 | 71.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 902 | 71.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 908 | 71.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 943 | 71.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 949 | 71.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 962 | 71.26 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 5 | 18 |