Os05g0337100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0337100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 311.85 | 0.83 | 3.02 | 0.319 | 0.224 | -1.57 | 0.54 | 33.8 | -0.212 | 5.5 | 33.63 | 14 | -- | -- |
| 318.77 | 0.838 | 3.05 | 0.0838 | 0.222 | 2.48 | 0.522 | -- | -0.213 | 5.58 | 33.63 | 14 | -- | -- |
| 312.55 | 0.823 | 3.02 | 0.32 | 0.227 | -1.56 | -- | 33.4 | -0.215 | 5.38 | 33.64 | 14 | -- | -- |
| 312.94 | 0.824 | 3.05 | 0.0992 | 0.106 | 3.51 | -- | -- | -0.21 | 9.03 | 35.07 | 73 | -- | -- |
| 315.19 | 0.827 | 3.02 | 0.322 | -- | -1.64 | -- | 33.6 | -0.211 | -- | 33.68 | 13 | -- | -- |
| 332.75 | 0.855 | 3.05 | 0.117 | 0.169 | -- | 0.402 | -- | -0.232 | 6.49 | -- | -- | -- | -- |
| 333.15 | 0.855 | 3.05 | 0.122 | 0.171 | -- | -- | -- | -0.233 | 6.33 | -- | -- | -- | -- |
| 313.63 | 0.825 | 3.05 | 0.0945 | -- | 3.67 | -- | -- | -0.213 | -- | 35.07 | 72 | -- | -- |
| 311.3 | 0.822 | 3.05 | -- | 0.219 | 3.87 | -- | -- | -0.226 | 5.45 | 35.09 | 88 | -- | -- |
| 334.67 | 0.855 | 3.06 | 0.127 | -- | -- | -- | -- | -0.23 | -- | -- | -- | -- | -- |
| 333.54 | 0.854 | 3.06 | -- | 0.173 | -- | -- | -- | -0.247 | 6.29 | -- | -- | -- | -- |
| 313.82 | 0.825 | 3.05 | -- | -- | 3.79 | -- | -- | -0.223 | -- | 35.09 | 84 | -- | -- |
| 335.09 | 0.854 | 3.06 | -- | -- | -- | -- | -- | -0.244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 306.53 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 2 | 306.87 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 9 | 4 |
| 5 | 307.53 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 16 |
| 6 | 307.62 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 6 | 2 |
| 21 | 307.71 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 24 | 307.78 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 25 | 307.85 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 59 | 307.94 | radiation | 30.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 157 | 308.05 | humidity | 70.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 179 | 308.13 | humidity | 80.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 214 | 308.18 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 239 | 308.29 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 5 |
| 306 | 308.53 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 359 | 308.53 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 481 | 309.28 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 523 | 309.75 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 631 | 310.77 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 652 | 311.28 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 4 |
| 662 | 311.59 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 663 | 311.59 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 684 | 311.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 702 | 311.81 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 703 | 311.84 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 725 | 311.96 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 742 | 312.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 752 | 312.50 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 21 | 18 |
| 756 | 312.56 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 772 | 312.62 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 781 | 312.71 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 21 | 14 |
| 787 | 312.79 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 788 | 312.79 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 797 | 312.87 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 23 | 11 |
| 812 | 313.07 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 816 | 313.12 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 837 | 313.26 | atmosphere | 1000.0 | 30 | < th | dose dependent | sin | 1 | NA |
| 838 | 313.28 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 845 | 313.38 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 8 | 22 |
| 891 | 313.73 | wind | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 898 | 313.77 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 922 | 314.04 | temperature | 30.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 940 | 314.23 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 9 | 3 |
| 961 | 314.27 | wind | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 962 | 314.27 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 1 | 10 |