Os05g0336200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peptide transporter.
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Os05g0336200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peptide transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.65 | 0.462 | 7.79 | -0.179 | 1.54 | 1.06 | -0.175 | 1.26 | -0.188 | 23 | 23.2 | 2131 | -- | -- |
| 99.45 | 0.464 | 7.75 | 0.304 | 1.53 | 1.1 | -0.187 | -- | -0.0511 | 22.9 | 23.4 | 2078 | -- | -- |
| 96.77 | 0.458 | 7.79 | -0.183 | 1.54 | 1.06 | -- | 1.29 | -0.191 | 23 | 23.19 | 2106 | -- | -- |
| 99.7 | 0.465 | 7.74 | 0.322 | 1.55 | 1.11 | -- | -- | -0.0382 | 23 | 23.39 | 2125 | -- | -- |
| 204.85 | 0.67 | 7.75 | 0.055 | -- | 1.04 | -- | 0.448 | -0.245 | -- | 22.3 | 1668 | -- | -- |
| 148.11 | 0.571 | 7.85 | -0.164 | 1.43 | -- | -0.356 | -- | -0.526 | 22.9 | -- | -- | -- | -- |
| 148.64 | 0.571 | 7.84 | -0.15 | 1.43 | -- | -- | -- | -0.525 | 23 | -- | -- | -- | -- |
| 206.1 | 0.672 | 7.74 | 0.176 | -- | 1.04 | -- | -- | -0.215 | -- | 22.3 | 1668 | -- | -- |
| 102.09 | 0.471 | 7.75 | -- | 1.54 | 1.04 | -- | -- | -0.0773 | 23 | 23.3 | 2128 | -- | -- |
| 276.32 | 0.777 | 7.81 | -0.118 | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
| 149.23 | 0.571 | 7.84 | -- | 1.43 | -- | -- | -- | -0.508 | 23 | -- | -- | -- | -- |
| 206.89 | 0.672 | 7.75 | -- | -- | 1.02 | -- | -- | -0.239 | -- | 22.3 | 1668 | -- | -- |
| 276.69 | 0.776 | 7.81 | -- | -- | -- | -- | -- | -0.501 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.93 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 25 | 99.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 32 | 100.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 37 | 100.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 38 | 100.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 64 | 100.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 65 | 100.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 67 | 100.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 68 | 100.46 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 99 | 100.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 120 | 100.79 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 165 | 101.12 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 183 | 101.23 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 226 | 101.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 276 | 101.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 288 | 101.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 303 | 102.07 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 324 | 102.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 328 | 102.24 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 329 | 102.24 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 333 | 102.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 355 | 102.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 476 | 102.79 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 501 | 102.89 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 520 | 102.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 576 | 103.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 647 | 103.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 12 | 21 |
| 991 | 103.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |