Os05g0333000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0333000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.39 | 0.543 | 6.01 | 0.385 | 1.36 | 0.784 | 1.42 | 1.24 | -0.244 | 12 | 79 | 1379 | -- | -- |
| 134.65 | 0.54 | 6.02 | 0.289 | 1.35 | 0.858 | 1.41 | -- | -0.265 | 12 | 79 | 1380 | -- | -- |
| 138.63 | 0.553 | 6 | 0.373 | 1.07 | 0.306 | -- | 1.11 | -0.207 | 11.4 | 79 | 1379 | -- | -- |
| 143.12 | 0.557 | 6.01 | 0.343 | 1.35 | 0.816 | -- | -- | -0.257 | 12.1 | 78.92 | 1379 | -- | -- |
| 185.23 | 0.637 | 6.02 | 0.306 | -- | 0.777 | -- | 1.16 | -0.2 | -- | 79 | 1379 | -- | -- |
| 143.59 | 0.562 | 6.01 | 0.328 | 1.33 | -- | 1.33 | -- | -0.226 | 11.9 | -- | -- | -- | -- |
| 151.22 | 0.576 | 6.01 | 0.382 | 1.33 | -- | -- | -- | -0.22 | 12 | -- | -- | -- | -- |
| 193.93 | 0.651 | 6.03 | 0.272 | -- | 0.784 | -- | -- | -0.209 | -- | 79 | 1379 | -- | -- |
| 146.19 | 0.563 | 6.02 | -- | 1.35 | 0.848 | -- | -- | -0.296 | 12.1 | 79 | 1367 | -- | -- |
| 262.34 | 0.757 | 6.03 | 0.341 | -- | -- | -- | -- | -0.238 | -- | -- | -- | -- | -- |
| 155.07 | 0.583 | 6.02 | -- | 1.32 | -- | -- | -- | -0.262 | 12 | -- | -- | -- | -- |
| 195.88 | 0.654 | 6.03 | -- | -- | 0.79 | -- | -- | -0.239 | -- | 79 | 1379 | -- | -- |
| 265.41 | 0.76 | 6.04 | -- | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.17 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 23 |
| 2 | 129.17 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 129.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 4 | 129.28 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 129.57 | humidity | 80.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 7 | 129.81 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 8 | 129.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 10 | 130.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 13 | 130.31 | wind | 9.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 14 | 130.31 | temperature | 10.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 16 | 130.31 | temperature | 30.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 17 | 130.31 | humidity | 50.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 20 | 130.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 21 | 130.31 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 23 | 130.31 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 28 | 130.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 2 | 1 |
| 29 | 130.31 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 30 | 130.31 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 35 | 130.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 39 | 130.44 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 41 | 130.49 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 45 | 130.52 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 53 | 130.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 60 | 130.85 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 61 | 130.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 64 | 130.85 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 68 | 130.85 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 77 | 130.85 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 78 | 130.85 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 98 | 130.85 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 107 | 130.87 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 2 |
| 108 | 130.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 110 | 130.89 | wind | 9.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 111 | 130.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 17 |
| 114 | 130.95 | wind | 3.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 122 | 131.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 128 | 131.16 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 138 | 131.28 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 146 | 131.36 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 156 | 131.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 163 | 131.54 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 168 | 131.65 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 9 |
| 170 | 131.67 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 188 | 131.88 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 190 | 131.88 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 192 | 131.88 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 196 | 131.90 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 225 | 131.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 257 | 132.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 267 | 132.07 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 13 |
| 313 | 132.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 322 | 132.21 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 339 | 132.29 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 341 | 132.29 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 343 | 132.31 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 348 | 132.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 351 | 132.33 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 352 | 132.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 370 | 132.43 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 376 | 132.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 10 |
| 382 | 132.50 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 395 | 132.54 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 397 | 132.55 | precipitation | 0.1 | 270 | > th | dose independent | sin | 10 | NA |
| 402 | 132.56 | temperature | 20.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 411 | 132.59 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 9 |
| 418 | 132.61 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 449 | 132.74 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 460 | 132.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 482 | 132.85 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 488 | 132.87 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 1 |
| 491 | 132.88 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 517 | 132.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 556 | 133.03 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 590 | 133.07 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 633 | 133.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 642 | 133.24 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 643 | 133.24 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 9 | NA |
| 648 | 133.25 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 652 | 133.26 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 6 |
| 668 | 133.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 676 | 133.32 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 22 |
| 689 | 133.34 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 12 |
| 693 | 133.36 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 17 |
| 734 | 133.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 778 | 133.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 798 | 133.62 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 19 |
| 848 | 133.69 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 12 |
| 865 | 133.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 867 | 133.72 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 877 | 133.74 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 879 | 133.75 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 16 |
| 890 | 133.77 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 893 | 133.79 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 906 | 133.82 | wind | 5.0 | 30 | < th | dose independent | rect. | 19 | 7 |
| 914 | 133.83 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 924 | 133.86 | temperature | 20.0 | 720 | > th | dose independent | sin | 19 | NA |
| 933 | 133.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 938 | 133.88 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 18 |
| 943 | 133.89 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 6 |
| 953 | 133.91 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 964 | 133.93 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 965 | 133.93 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 980 | 133.95 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 14 |
| 996 | 133.97 | wind | 1.0 | 90 | < th | dose independent | rect. | 15 | 13 |