Os05g0332300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CBL-interacting protein kinase 2.
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Os05g0332300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CBL-interacting protein kinase 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 216.37 | 0.691 | 9.13 | -2.28 | 4 | -2.15 | 3.02 | -1.45 | -0.86 | 6.99 | 60.57 | 1309 | 11.6 | 2.11 |
| 220.01 | 0.691 | 9.14 | -2.29 | 3.98 | -2.08 | 3.24 | -- | -0.834 | 6.97 | 59.74 | 1300 | 11.7 | 2.03 |
| 239.74 | 0.721 | 9.13 | -2.21 | 3.98 | -2.12 | -- | -1.7 | -0.875 | 7 | 60.8 | 1297 | 11.6 | 2.07 |
| 245.47 | 0.73 | 9.15 | -2.3 | 3.99 | -2.06 | -- | -- | -0.861 | 6.96 | 58.4 | 1312 | 11.7 | 1.93 |
| 334.6 | 0.852 | 9.37 | -1.83 | -- | -5.9 | -- | 1.65 | -0.835 | -- | -7.135 | 1869 | 10.8 | 9.56 |
| 320.02 | 0.839 | 9.15 | -2.03 | 4.16 | -- | 3.07 | -- | -0.896 | 7.23 | -- | -- | -- | -- |
| 345.25 | 0.87 | 9.15 | -1.96 | 4.17 | -- | -- | -- | -0.902 | 7.21 | -- | -- | -- | -- |
| 274.3 | 0.771 | 9.23 | -2.07 | -- | -5.64 | -- | -- | -0.816 | -- | -49.07 | 1891 | 10.4 | 9.93 |
| 368.95 | 0.895 | 9.12 | -- | 4.03 | -1.74 | -- | -- | -0.761 | 7.03 | 61.36 | 1232 | 12.8 | 1.42 |
| 1263.44 | 1.66 | 9.25 | -1.89 | -- | -- | -- | -- | -0.83 | -- | -- | -- | -- | -- |
| 446.8 | 0.989 | 9.1 | -- | 4.15 | -- | -- | -- | -0.684 | 7.24 | -- | -- | -- | -- |
| 384.37 | 0.913 | 9.2 | -- | -- | -5.44 | -- | -- | -0.622 | -- | -67.45 | 1888 | 10.5 | 9.93 |
| 1357.39 | 1.72 | 9.2 | -- | -- | -- | -- | -- | -0.621 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.15 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 3 | 238.45 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 5 | 239.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 18 | 241.35 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 19 | 241.49 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 24 | 241.74 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 33 | 241.99 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 39 | 242.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 42 | 242.58 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 44 | 242.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 47 | 242.75 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 55 | 242.90 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 118 | 244.08 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 21 | NA |
| 131 | 244.36 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 134 | 244.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 216 | 245.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 247 | 246.06 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 266 | 246.26 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 274 | 246.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 275 | 246.32 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 411 | 247.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 434 | 247.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 438 | 247.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 463 | 247.81 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 541 | 248.36 | radiation | 1.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 543 | 248.37 | humidity | 70.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 551 | 248.40 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 593 | 248.70 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 648 | 249.00 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 649 | 249.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 685 | 249.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 697 | 249.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 773 | 249.55 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 774 | 249.55 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 781 | 249.60 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 820 | 249.78 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 847 | 249.89 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 870 | 249.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 876 | 250.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 908 | 250.07 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 916 | 250.10 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 969 | 250.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |