Os05g0332000 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0332000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Prolamin precursor.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	3.34	(0.0514)	R²	:	0.0235
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.359	(0.108)	R²_dN8	:	0.0304	R²_N8	:	0.0235
σ	:	0.968
deviance	:	430.11
__

_____

C
peak time of C	:	--
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
399.12	0.939	3.33	-0.719	0.0971	-1.7	1.15	18.1	0.29	7.71	0.06757	10	--	--
402.74	0.942	3.36	-0.714	0.031	3.48	1.08	--	0.293	6.92	0.9809	2	--	--
401.94	0.934	3.33	-0.687	0.154	-1.64	--	18	0.291	11.5	0.1473	9	--	--
404.61	0.943	3.35	-0.691	0.138	3.63	--	--	0.294	12.2	0.9809	2	--	--
403.29	0.935	3.34	-0.692	--	-1.61	--	18	0.289	--	0.196	9	--	--
414.66	0.955	3.36	-0.679	0.0399	--	1.24	--	0.288	6.59	--	--	--	--
417.68	0.957	3.36	-0.656	0.124	--	--	--	0.287	11.3	--	--	--	--
405.06	0.937	3.36	-0.714	--	3.61	--	--	0.297	--	0.3257	9	--	--
417.15	0.956	3.34	--	0.146	3.46	--	--	0.37	12.4	0.9713	4	--	--
418.65	0.956	3.36	-0.659	--	--	--	--	0.286	--	--	--	--	--
429.02	0.969	3.34	--	0.132	--	--	--	0.36	11.6	--	--	--	--
418.3	0.953	3.34	--	--	3.38	--	--	0.365	--	0.4278	9	--	--
430.11	0.968	3.34	--	--	--	--	--	0.359	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	384.77	wind	5.0	10	> th	dose dependent	rect.	21	4
19	386.34	wind	5.0	10	> th	dose independent	rect.	21	11
22	386.47	wind	5.0	10	> th	dose independent	rect.	21	9
24	386.57	wind	5.0	10	> th	dose independent	rect.	21	7
41	387.97	wind	7.0	1440	> th	dose independent	rect.	3	1
42	387.97	wind	7.0	1440	> th	dose dependent	rect.	3	1
47	388.07	wind	1.0	270	< th	dose dependent	rect.	22	1
52	388.61	precipitation	0.1	10	< th	dose independent	rect.	11	23
53	388.61	precipitation	0.1	10	< th	dose dependent	rect.	11	23
55	390.44	precipitation	0.1	90	> th	dose independent	rect.	22	10
58	390.84	precipitation	0.1	90	> th	dose independent	rect.	22	7
61	391.20	atmosphere	1005.0	90	> th	dose dependent	rect.	2	7
63	391.45	wind	9.0	1440	< th	dose independent	rect.	5	5
70	391.77	precipitation	0.1	30	> th	dose independent	rect.	23	19
72	391.80	wind	1.0	10	< th	dose dependent	rect.	1	1
73	391.87	wind	9.0	4320	< th	dose independent	rect.	9	1
74	391.95	wind	9.0	1440	< th	dose independent	rect.	3	7
90	392.54	wind	7.0	14400	> th	dose dependent	rect.	8	2
92	392.65	temperature	20.0	14400	< th	dose dependent	rect.	5	2
94	392.70	precipitation	0.1	270	> th	dose dependent	rect.	20	8
96	392.77	radiation	40.0	90	> th	dose dependent	rect.	14	20
97	392.88	wind	1.0	14400	< th	dose dependent	rect.	6	1
99	392.97	precipitation	0.1	90	> th	dose dependent	rect.	22	10
102	392.99	wind	1.0	270	< th	dose independent	rect.	22	1
106	393.15	atmosphere	1015.0	14400	> th	dose dependent	rect.	3	1
109	393.22	wind	9.0	1440	< th	dose independent	rect.	1	9
115	393.37	wind	1.0	10	< th	dose dependent	rect.	17	9
118	393.38	wind	1.0	10	< th	dose dependent	rect.	21	5
132	393.49	atmosphere	1005.0	90	> th	dose dependent	rect.	5	4
133	393.50	temperature	20.0	14400	< th	dose independent	rect.	6	1
141	393.52	wind	3.0	10	< th	dose dependent	rect.	8	3
153	393.63	wind	1.0	14400	> th	dose independent	rect.	6	1
155	393.63	precipitation	0.1	30	> th	dose dependent	rect.	23	19
157	393.63	temperature	10.0	30	> th	dose dependent	rect.	11	22
162	393.66	radiation	40.0	90	> th	dose dependent	rect.	9	1
163	393.67	wind	1.0	14400	< th	dose independent	rect.	6	1
165	393.68	precipitation	0.1	270	> th	dose independent	rect.	22	1
167	393.68	precipitation	0.1	270	> th	dose dependent	rect.	22	1
211	393.87	wind	5.0	10	> th	dose independent	rect.	24	6
218	393.89	atmosphere	1005.0	10	> th	dose dependent	rect.	2	8
222	393.92	wind	9.0	1440	> th	dose independent	rect.	9	1
236	393.96	wind	1.0	90	< th	dose independent	rect.	8	3
237	393.98	wind	9.0	1440	< th	dose independent	rect.	7	3
238	393.98	wind	5.0	30	> th	dose dependent	rect.	24	6
240	393.99	wind	1.0	14400	< th	dose dependent	rect.	4	3
241	394.00	wind	5.0	10	> th	dose independent	rect.	24	2
245	394.00	wind	5.0	10	> th	dose dependent	rect.	24	2
264	394.06	wind	5.0	10	> th	dose independent	sin	11	NA
275	394.11	precipitation	0.1	43200	< th	dose independent	rect.	8	4
276	394.11	precipitation	0.1	43200	< th	dose dependent	rect.	8	4
278	394.12	wind	1.0	14400	< th	dose dependent	rect.	4	1
281	394.14	temperature	20.0	14400	> th	dose independent	rect.	6	1
286	394.17	precipitation	0.1	30	> th	dose independent	rect.	23	1
289	394.17	precipitation	0.1	30	> th	dose dependent	rect.	23	1
294	394.20	precipitation	0.1	270	> th	dose dependent	rect.	20	13
295	394.23	radiation	1.0	720	> th	dose independent	rect.	9	21
296	394.24	precipitation	0.1	43200	> th	dose independent	rect.	24	6
298	394.26	precipitation	0.1	43200	> th	dose independent	rect.	4	12
299	394.28	precipitation	0.1	43200	< th	dose independent	rect.	24	6
300	394.28	precipitation	0.1	43200	< th	dose dependent	rect.	24	6
301	394.29	wind	1.0	270	< th	dose independent	rect.	6	1
303	394.30	precipitation	0.1	43200	> th	dose independent	rect.	8	4
305	394.30	precipitation	0.1	43200	< th	dose independent	rect.	4	12
307	394.30	precipitation	0.1	43200	> th	dose dependent	rect.	8	4
308	394.30	precipitation	0.1	43200	> th	dose dependent	rect.	4	11
309	394.30	precipitation	0.1	43200	< th	dose dependent	rect.	4	12
321	394.39	atmosphere	1015.0	14400	< th	dose independent	rect.	19	1
327	394.45	atmosphere	1015.0	14400	< th	dose independent	rect.	14	3
330	394.47	humidity	70.0	43200	< th	dose dependent	rect.	5	3
334	394.49	atmosphere	1015.0	14400	< th	dose independent	rect.	12	1
339	394.51	precipitation	0.1	43200	< th	dose independent	rect.	21	12
340	394.51	precipitation	0.1	43200	> th	dose dependent	rect.	24	6
341	394.51	precipitation	0.1	43200	< th	dose dependent	rect.	21	12
349	394.55	precipitation	0.1	43200	> th	dose independent	rect.	21	12
353	394.56	atmosphere	1015.0	14400	> th	dose independent	rect.	13	4
356	394.56	atmosphere	1015.0	14400	> th	dose independent	rect.	12	8
358	394.56	atmosphere	1015.0	14400	> th	dose dependent	rect.	12	3
362	394.57	atmosphere	1015.0	14400	< th	dose independent	rect.	12	6
364	394.57	atmosphere	1015.0	14400	< th	dose independent	rect.	12	8
365	394.57	precipitation	0.1	43200	> th	dose independent	rect.	1	14
366	394.57	humidity	70.0	43200	< th	dose dependent	rect.	7	1
373	394.58	precipitation	0.1	43200	< th	dose independent	rect.	1	14
379	394.58	precipitation	0.1	43200	< th	dose dependent	rect.	1	14
392	394.61	humidity	50.0	14400	< th	dose dependent	rect.	12	1
398	394.63	precipitation	0.1	43200	< th	dose independent	sin	8	NA
400	394.63	precipitation	0.1	270	> th	dose independent	rect.	20	13
401	394.63	precipitation	0.1	43200	< th	dose dependent	sin	8	NA
404	394.63	precipitation	0.1	43200	> th	dose dependent	rect.	1	14
405	394.63	temperature	20.0	14400	< th	dose dependent	rect.	3	15
411	394.65	precipitation	0.1	43200	> th	dose independent	sin	8	NA
431	394.67	wind	1.0	90	< th	dose independent	rect.	9	1
447	394.70	precipitation	0.1	43200	> th	dose dependent	sin	7	NA
475	394.73	precipitation	0.1	43200	> th	dose dependent	rect.	21	11
504	394.78	wind	7.0	1440	> th	dose dependent	rect.	7	3
518	394.80	wind	5.0	10	< th	dose independent	sin	11	NA
551	394.86	temperature	20.0	14400	> th	dose independent	rect.	3	1
559	394.88	wind	1.0	90	< th	dose independent	rect.	6	6
567	394.89	precipitation	0.1	43200	> th	dose independent	rect.	22	8
577	394.90	wind	1.0	43200	< th	dose dependent	rect.	16	4
581	394.91	wind	5.0	10	< th	dose independent	rect.	21	9
598	394.94	precipitation	0.1	43200	> th	dose independent	rect.	10	1
602	394.94	precipitation	0.1	43200	> th	dose dependent	rect.	10	1
613	394.96	precipitation	0.1	43200	< th	dose independent	rect.	22	8
615	394.96	precipitation	0.1	43200	< th	dose dependent	rect.	22	8
618	394.97	wind	5.0	4320	> th	dose independent	rect.	6	3
622	394.98	precipitation	0.1	43200	< th	dose independent	rect.	10	1
623	394.98	precipitation	0.1	43200	< th	dose dependent	rect.	10	1
632	395.00	temperature	20.0	14400	< th	dose dependent	sin	4	NA
638	395.01	wind	9.0	1440	< th	dose independent	rect.	23	11
644	395.02	radiation	1.0	90	> th	dose independent	rect.	9	20
659	395.05	temperature	20.0	14400	< th	dose independent	rect.	3	1
660	395.05	radiation	1.0	90	> th	dose independent	rect.	9	10
679	395.07	precipitation	0.1	43200	> th	dose dependent	rect.	22	8
686	395.09	humidity	70.0	43200	< th	dose independent	rect.	3	5
739	395.21	temperature	20.0	14400	< th	dose independent	rect.	2	9
756	395.23	temperature	20.0	14400	< th	dose independent	rect.	3	7
777	395.26	temperature	20.0	14400	> th	dose independent	rect.	3	8
780	395.26	wind	1.0	720	< th	dose dependent	rect.	4	1
805	395.31	wind	7.0	14400	> th	dose independent	rect.	8	2
820	395.33	temperature	15.0	30	> th	dose dependent	rect.	17	16
895	395.44	temperature	20.0	14400	< th	dose independent	rect.	3	4
902	395.44	temperature	20.0	30	> th	dose dependent	rect.	20	13
932	395.51	humidity	70.0	43200	< th	dose independent	rect.	24	8