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Os05g0331200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to External rotenone-insensitive NADPH dehydrogenase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.17 (0.0331) R2 : 0.671
β1 : 1.65 (0.131) R2dD : 0.141 R2D : -0.00495
β2 : 2.04 (0.0786) R2dC : 0.489 R2C : 0.48
β3 : -1.77 (0.126) R2dE : 0.195 R2E : 0.0574
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.283 (0.0757) R2dN8 : 0.0144 R2N8 : -0.0403
σ : 0.605
deviance : 168.67
__
_____
C
peak time of C : 14.1
E
wheather : temperature
threshold : 20.7
memory length : 1761
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
166.37 0.606 7.15 1.8 2.04 -1.66 -0.458 0.877 0.295 14.1 20.7 1718 -- --
168.2 0.604 7.15 1.7 2.03 -1.8 -0.394 -- 0.301 14.1 20.78 1761 -- --
167.13 0.602 7.14 1.79 2.03 -1.67 -- 0.855 0.3 14.1 20.7 1760 -- --
168.67 0.605 7.17 1.65 2.04 -1.77 -- -- 0.283 14.1 20.7 1761 -- --
383.2 0.912 7.13 1.87 -- -1.68 -- 1.31 0.308 -- 20.72 1053 -- --
239.31 0.725 7.27 0.847 2.04 -- -0.47 -- -0.176 14.1 -- -- -- --
240.14 0.726 7.27 0.833 2.04 -- -- -- -0.179 14.1 -- -- -- --
383.95 0.913 7.18 1.51 -- -1.88 -- -- 0.249 -- 20.89 1062 -- --
216.41 0.685 7.21 -- 1.97 -1.08 -- -- 0.0415 14.1 22 1298 -- --
489.56 1.03 7.29 0.748 -- -- -- -- -0.227 -- -- -- -- --
258.44 0.752 7.29 -- 2.02 -- -- -- -0.271 14.1 -- -- -- --
415.32 0.949 7.2 -- -- -1.49 -- -- 0.183 -- 24.81 1043 -- --
504.32 1.05 7.31 -- -- -- -- -- -0.31 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 165.99 temperature 20 4320 < th dose dependent rect. 1 2
2 166.03 temperature 20 1440 > th dose independent rect. 3 10
3 166.07 temperature 20 1440 < th dose independent rect. 3 10
4 166.11 humidity 50 43200 < th dose dependent rect. 13 2
11 166.36 wind 9 43200 > th dose independent rect. 8 9
12 166.38 humidity 50 43200 < th dose dependent rect. 11 4
13 166.40 humidity 60 43200 < th dose independent rect. 8 1
35 166.91 humidity 50 43200 > th dose independent rect. 20 17
41 166.96 wind 9 43200 < th dose independent rect. 8 9
43 166.98 wind 9 43200 > th dose independent sin 23 NA
46 167.00 humidity 50 43200 < th dose independent rect. 20 17
51 167.07 humidity 50 43200 < th dose independent rect. 11 1
67 167.17 humidity 50 43200 < th dose dependent rect. 20 19
68 167.17 humidity 50 43200 < th dose dependent rect. 11 21
70 167.19 humidity 50 43200 < th dose dependent rect. 11 19
80 167.22 humidity 50 43200 < th dose dependent rect. 11 11
81 167.22 humidity 50 43200 < th dose dependent rect. 3 12
107 167.25 humidity 50 43200 < th dose dependent rect. 17 22
108 167.26 humidity 50 43200 > th dose independent sin 8 NA
124 167.32 humidity 50 43200 < th dose independent sin 8 NA
165 167.41 humidity 50 43200 < th dose independent rect. 3 11
180 167.43 wind 9 43200 < th dose independent rect. 3 15
184 167.44 humidity 50 43200 > th dose independent rect. 3 10
194 167.47 humidity 50 43200 < th dose dependent sin 23 NA
206 167.51 wind 9 43200 < th dose independent sin 0 NA
250 167.57 wind 9 43200 > th dose independent rect. 3 15
254 167.58 temperature 20 1440 > th dose independent rect. 3 15
279 167.61 humidity 60 43200 < th dose independent rect. 20 14
308 167.66 humidity 50 43200 < th dose dependent rect. 7 21
314 167.67 temperature 20 1440 < th dose independent rect. 3 16
316 167.67 humidity 50 43200 < th dose dependent no NA NA
323 167.67 humidity 50 43200 < th dose dependent rect. 7 15
330 167.67 humidity 50 43200 < th dose dependent rect. 3 19
440 167.77 humidity 60 43200 < th dose dependent rect. 20 14
470 167.84 humidity 50 43200 < th dose independent rect. 16 1
505 167.89 wind 9 43200 > th dose independent rect. 9 22
515 167.92 humidity 60 43200 > th dose independent rect. 8 1
533 167.95 wind 9 43200 > th dose independent rect. 11 22
576 168.12 humidity 50 43200 > th dose independent rect. 16 1
589 168.17 temperature 20 4320 < th dose dependent sin 9 NA
621 168.29 temperature 20 1440 > th dose independent sin 3 NA
635 168.36 wind 9 43200 > th dose independent rect. 9 5
640 168.37 wind 9 43200 > th dose dependent rect. 11 21
647 168.39 humidity 50 43200 > th dose independent rect. 11 1
658 168.41 temperature 20 1440 < th dose independent sin 3 NA
671 168.46 humidity 50 43200 < th dose independent rect. 10 4
677 168.48 wind 9 43200 < th dose independent rect. 21 21
691 168.53 wind 3 43200 < th dose independent rect. 11 1
711 168.59 humidity 80 43200 < th dose independent rect. 6 1
722 168.62 temperature 20 14400 < th dose independent rect. 21 1
724 168.62 wind 9 43200 < th dose independent rect. 9 23
737 168.66 wind 9 43200 > th dose independent rect. 21 21
780 168.75 wind 3 43200 > th dose independent rect. 11 1
791 168.77 humidity 60 43200 < th dose dependent rect. 7 3
800 168.81 humidity 50 43200 < th dose independent rect. 13 1
813 168.84 wind 9 43200 < th dose independent rect. 9 5
828 168.85 wind 9 43200 < th dose dependent rect. 22 2
847 168.89 humidity 80 43200 < th dose dependent rect. 16 8
848 168.89 humidity 80 43200 < th dose dependent rect. 15 10
883 168.96 humidity 80 43200 < th dose dependent rect. 12 13
910 169.01 humidity 90 43200 < th dose dependent rect. 20 1
912 169.02 humidity 50 43200 > th dose independent rect. 10 3
933 169.05 humidity 80 43200 < th dose dependent sin 17 NA
978 169.15 wind 1 43200 > th dose dependent rect. 22 2