FiT-DB / Search/ Help/ Sample detail

Os05g0330700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.45 (0.0276) R2 : 0.419
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.716 (0.0693) R2dC : 0.136 R2C : 0.129
β3 : 1.44 (0.0992) R2dE : 0.321 R2E : 0.278
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.139 (0.0622) R2dN8 : 0.00923 R2N8 : -0.035
σ : 0.507
deviance : 118.61
__
_____
C
peak time of C : 7.83
E
wheather : temperature
threshold : 13.81
memory length : 10715
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
101.58 0.474 8.46 0.145 0.72 1.04 0.828 -3.48 0.102 7.48 25.71 1516 -- --
104.07 0.475 8.38 0.9 0.73 0.869 0.933 -- 0.196 7.46 20.6 4822 -- --
103.26 0.473 8.46 0.22 0.758 1.07 -- -3.55 0.121 7.54 25.84 1605 -- --
106.23 0.48 8.37 0.941 0.726 0.845 -- -- 0.204 7.78 20.8 4827 -- --
130.07 0.531 8.48 0.231 -- 0.983 -- -3.25 0.124 -- 26.01 1411 -- --
124.61 0.523 8.34 1.3 0.695 -- 0.936 -- 0.378 7.31 -- -- -- --
126.77 0.527 8.34 1.32 0.695 -- -- -- 0.378 7.63 -- -- -- --
131.8 0.535 8.4 0.943 -- 0.819 -- -- 0.188 -- 21.13 5723 -- --
118.61 0.507 8.45 -- 0.716 1.44 -- -- -0.139 7.83 13.81 10715 -- --
152.73 0.577 8.35 1.33 -- -- -- -- 0.388 -- -- -- -- --
172.88 0.615 8.37 -- 0.706 -- -- -- 0.23 7.5 -- -- -- --
139.36 0.55 8.47 -- -- 1.33 -- -- -0.141 -- 10.55 34557 -- --
199.55 0.659 8.39 -- -- -- -- -- 0.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.58 temperature 10.0 90 > th dose dependent rect. 4 17
2 91.53 temperature 30.0 90 < th dose independent rect. 9 19
4 92.28 temperature 30.0 30 < th dose independent rect. 11 17
6 92.58 temperature 10.0 270 > th dose dependent rect. 2 19
26 94.72 radiation 40.0 90 < th dose dependent rect. 4 7
35 95.42 humidity 50.0 90 > th dose dependent rect. 19 9
43 95.72 radiation 1.0 270 < th dose dependent rect. 5 22
44 95.77 radiation 30.0 90 < th dose independent rect. 4 7
49 95.87 temperature 10.0 270 > th dose dependent rect. 3 3
54 95.94 wind 9.0 90 < th dose dependent rect. 4 5
58 96.00 temperature 10.0 90 > th dose dependent rect. 4 5
64 96.13 atmosphere 1010.0 90 < th dose independent rect. 4 5
73 96.47 temperature 30.0 270 < th dose independent rect. 6 22
80 96.65 humidity 70.0 90 > th dose independent rect. 19 9
88 96.85 radiation 30.0 90 < th dose independent rect. 4 5
90 96.88 wind 9.0 90 < th dose independent rect. 9 19
92 96.96 humidity 70.0 90 > th dose independent rect. 4 5
93 97.03 humidity 50.0 90 > th dose dependent rect. 4 5
94 97.07 temperature 30.0 90 < th dose independent rect. 4 5
95 97.07 precipitation 0.1 90 < th dose independent rect. 4 5
96 97.07 precipitation 0.1 90 < th dose dependent rect. 4 5
98 97.11 wind 7.0 90 < th dose independent rect. 4 5
100 97.12 radiation 40.0 90 < th dose dependent rect. 4 5
101 97.13 radiation 1.0 270 < th dose independent rect. 6 21
108 97.20 temperature 10.0 90 > th dose independent rect. 4 5
110 97.20 humidity 50.0 90 > th dose independent rect. 4 5
111 97.20 atmosphere 995.0 90 > th dose independent rect. 4 5
114 97.20 temperature 10.0 90 > th dose independent rect. 9 19
122 97.30 temperature 10.0 270 > th dose dependent rect. 2 6
125 97.34 wind 7.0 270 < th dose dependent rect. 3 3
131 97.44 atmosphere 995.0 90 > th dose independent rect. 9 19
144 97.60 wind 3.0 270 < th dose independent rect. 3 3
153 97.70 temperature 15.0 90 > th dose independent rect. 4 15
158 97.79 atmosphere 1015.0 90 < th dose independent rect. 9 19
164 97.85 radiation 30.0 10 < th dose independent rect. 4 16
172 97.94 humidity 50.0 90 > th dose dependent rect. 9 19
173 97.96 radiation 1.0 270 < th dose dependent rect. 12 15
177 97.98 precipitation 0.1 90 < th dose independent rect. 4 15
178 97.98 precipitation 0.1 90 < th dose dependent rect. 4 15
199 98.10 wind 9.0 270 < th dose dependent rect. 4 1
203 98.13 precipitation 0.1 270 < th dose independent rect. 3 3
204 98.13 wind 9.0 270 < th dose independent rect. 5 23
205 98.13 precipitation 0.1 270 < th dose dependent rect. 3 3
215 98.22 wind 9.0 270 < th dose independent rect. 6 21
217 98.26 radiation 40.0 90 < th dose independent rect. 4 16
218 98.26 radiation 1.0 10 < th dose dependent sin 11 NA
219 98.27 radiation 20.0 90 < th dose independent rect. 4 9
230 98.33 wind 7.0 90 < th dose independent rect. 19 9
235 98.36 humidity 50.0 90 > th dose dependent rect. 4 7
239 98.39 temperature 10.0 90 > th dose independent rect. 19 9
240 98.39 temperature 30.0 90 < th dose independent rect. 19 9
241 98.39 humidity 50.0 90 > th dose independent rect. 19 9
243 98.39 atmosphere 995.0 90 > th dose independent rect. 19 9
244 98.39 radiation 1.0 90 < th dose independent rect. 19 9
250 98.39 atmosphere 1015.0 90 < th dose independent rect. 4 15
253 98.39 radiation 1.0 90 < th dose dependent rect. 19 9
258 98.40 radiation 10.0 270 < th dose independent rect. 3 3
276 98.52 radiation 40.0 14400 < th dose dependent rect. 21 8
288 98.61 humidity 50.0 270 > th dose dependent rect. 3 3
290 98.62 radiation 1.0 270 < th dose independent rect. 12 15
302 98.70 wind 3.0 270 < th dose independent rect. 4 1
303 98.70 precipitation 0.1 270 < th dose independent rect. 4 1
304 98.70 precipitation 0.1 270 < th dose dependent rect. 4 1
307 98.74 atmosphere 1010.0 270 < th dose independent rect. 3 3
311 98.76 atmosphere 1015.0 90 < th dose independent rect. 21 7
312 98.77 radiation 1.0 1440 < th dose dependent rect. 22 7
320 98.81 humidity 50.0 270 > th dose dependent rect. 4 1
336 98.92 wind 3.0 270 < th dose independent rect. 2 5
338 98.94 wind 9.0 90 < th dose dependent rect. 19 9
342 98.95 temperature 10.0 270 > th dose independent rect. 3 3
344 98.95 temperature 30.0 270 < th dose independent rect. 3 3
345 98.95 humidity 50.0 270 > th dose independent rect. 3 3
348 98.95 atmosphere 995.0 270 > th dose independent rect. 3 3
354 98.95 temperature 10.0 270 > th dose independent rect. 6 21
356 98.95 wind 7.0 30 < th dose dependent rect. 4 7
361 99.00 radiation 10.0 270 < th dose dependent rect. 4 1
365 99.01 humidity 50.0 90 > th dose independent rect. 9 19
367 99.03 wind 7.0 270 < th dose independent rect. 4 1
368 99.03 radiation 40.0 270 < th dose dependent rect. 3 3
371 99.04 temperature 20.0 720 > th dose dependent rect. 21 17
377 99.07 wind 9.0 90 < th dose independent rect. 4 15
383 99.09 radiation 40.0 1440 < th dose dependent rect. 18 11
397 99.10 temperature 20.0 720 > th dose dependent sin 7 NA
409 99.15 wind 7.0 270 < th dose dependent rect. 2 5
413 99.17 temperature 10.0 270 > th dose independent rect. 4 1
415 99.17 temperature 30.0 270 < th dose independent rect. 4 1
416 99.17 humidity 50.0 270 > th dose independent rect. 4 1
419 99.17 atmosphere 995.0 270 > th dose independent rect. 4 1
420 99.17 atmosphere 1010.0 270 < th dose independent rect. 4 1
427 99.17 temperature 10.0 270 > th dose independent rect. 5 23
430 99.18 humidity 60.0 90 > th dose dependent rect. 15 13
446 99.26 humidity 50.0 90 > th dose dependent rect. 11 17
462 99.34 radiation 1.0 1440 < th dose dependent rect. 18 11
526 99.57 atmosphere 1015.0 90 < th dose dependent rect. 4 5
557 99.68 radiation 40.0 90 < th dose dependent rect. 4 15
569 99.74 wind 3.0 30 < th dose independent rect. 4 7
584 99.82 precipitation 0.1 90 < th dose independent rect. 9 19
585 99.82 precipitation 0.1 90 < th dose dependent rect. 9 19
593 99.87 precipitation 0.1 90 < th dose independent rect. 20 8
596 99.87 precipitation 0.1 90 < th dose dependent rect. 20 8
628 99.99 radiation 1.0 4320 < th dose independent rect. 18 10
635 100.05 precipitation 0.1 270 < th dose independent rect. 2 5
638 100.05 precipitation 0.1 270 < th dose dependent rect. 2 5
653 100.11 wind 9.0 270 < th dose independent rect. 7 19
656 100.13 radiation 1.0 14400 < th dose independent rect. 18 1
667 100.15 radiation 1.0 14400 < th dose independent rect. 18 6
762 100.44 radiation 1.0 4320 > th dose independent rect. 18 1
784 100.49 humidity 50.0 270 > th dose dependent rect. 2 5
790 100.52 temperature 25.0 1440 > th dose dependent rect. 16 1
793 100.52 wind 9.0 30 < th dose dependent rect. 9 19
802 100.54 radiation 40.0 270 < th dose dependent rect. 2 6
809 100.57 temperature 30.0 30 < th dose independent rect. 4 7
824 100.62 humidity 70.0 270 > th dose independent rect. 2 5
836 100.66 temperature 10.0 270 > th dose independent rect. 2 5
838 100.66 temperature 30.0 270 < th dose independent rect. 2 5
839 100.66 humidity 50.0 270 > th dose independent rect. 2 5
841 100.66 atmosphere 995.0 270 > th dose independent rect. 2 5
842 100.66 atmosphere 1015.0 270 < th dose independent rect. 2 5
847 100.66 temperature 10.0 270 > th dose independent rect. 7 19
892 100.74 humidity 50.0 270 > th dose independent rect. 6 22
893 100.74 radiation 1.0 14400 < th dose dependent rect. 2 3
919 100.80 temperature 10.0 1440 > th dose independent rect. 5 5
922 100.80 atmosphere 995.0 1440 > th dose independent rect. 5 5
923 100.80 atmosphere 1015.0 1440 < th dose independent rect. 5 5
925 100.80 temperature 10.0 1440 > th dose independent rect. 10 19
928 100.80 radiation 1.0 1440 < th dose dependent rect. 18 1
931 100.82 atmosphere 1010.0 90 < th dose independent rect. 4 7
945 100.85 temperature 10.0 720 > th dose dependent rect. 20 19
956 100.88 radiation 1.0 10 < th dose independent sin 11 NA
980 100.92 radiation 1.0 14400 < th dose dependent rect. 18 1