Os05g0326700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0326700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.05 | 0.634 | 3.89 | -0.111 | 1.02 | 7.01 | -0.255 | -45.9 | 0.038 | 16.3 | 1004 | 33 | 5.22 | 2.27 |
| 195.3 | 0.656 | 3.88 | 0.00562 | 0.98 | 3.36 | 0.198 | -- | 0.017 | 16.3 | 1003 | 2 | 7.45 | 0.886 |
| 181.09 | 0.627 | 3.9 | -0.148 | 0.973 | 9.05 | -- | -58.1 | 0.00241 | 16.1 | 1004 | 30 | 5.33 | 1.33 |
| 195.4 | 0.655 | 3.88 | 0.00759 | 0.981 | 3.35 | -- | -- | 0.018 | 16.3 | 1003 | 2 | 7.45 | 1.36 |
| 234.64 | 0.713 | 3.9 | -0.206 | -- | 8.81 | -- | -59.4 | -0.000844 | -- | 1004 | 33 | 5.47 | 1.74 |
| 212.33 | 0.683 | 3.88 | 0.0372 | 0.949 | -- | 0.113 | -- | 0.00392 | 16.1 | -- | -- | -- | -- |
| 212.37 | 0.682 | 3.88 | 0.0385 | 0.95 | -- | -- | -- | 0.00454 | 16.1 | -- | -- | -- | -- |
| 247.15 | 0.735 | 3.87 | -0.0287 | -- | 3.05 | -- | -- | -0.00915 | -- | 1003 | 2 | 7.45 | 1.36 |
| 195.41 | 0.655 | 3.88 | -- | 0.981 | 3.35 | -- | -- | 0.0172 | 16.3 | 1003 | 2 | 7.45 | 1.51 |
| 261.36 | 0.755 | 3.87 | 7.5e-05 | -- | -- | -- | -- | -0.0208 | -- | -- | -- | -- | -- |
| 212.4 | 0.682 | 3.88 | -- | 0.949 | -- | -- | -- | 0.000255 | 16.1 | -- | -- | -- | -- |
| 247.18 | 0.735 | 3.87 | -- | -- | 3.05 | -- | -- | -0.00599 | -- | 1003 | 2 | 7.45 | 2.12 |
| 261.36 | 0.755 | 3.87 | -- | -- | -- | -- | -- | -0.0208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.84 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 14 | 191.99 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 56 | 195.36 | temperature | 25.0 | 90 | > th | dose independent | rect. | 6 | 3 |
| 60 | 195.93 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 3 |
| 61 | 196.30 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 121 | 196.30 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 181 | 196.63 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 182 | 196.73 | radiation | 30.0 | 90 | > th | dose independent | rect. | 7 | 1 |
| 203 | 197.41 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 204 | 197.57 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 205 | 197.57 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 230 | 198.38 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 276 | 198.99 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 283 | 199.26 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 456 | 201.03 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 466 | 201.33 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 20 |
| 479 | 201.50 | radiation | 10.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 541 | 202.22 | wind | 5.0 | 90 | > th | dose dependent | rect. | 20 | 6 |
| 547 | 202.30 | wind | 5.0 | 90 | > th | dose dependent | rect. | 20 | 10 |
| 555 | 202.38 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 670 | 202.79 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 6 |
| 677 | 202.83 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 698 | 202.94 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 709 | 203.07 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 710 | 203.07 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 739 | 203.24 | radiation | 10.0 | 90 | > th | dose independent | rect. | 16 | 16 |
| 743 | 203.26 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 6 |
| 744 | 203.27 | radiation | 1.0 | 90 | < th | dose independent | sin | 6 | NA |
| 777 | 203.52 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 5 |
| 782 | 203.53 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 8 |
| 794 | 203.59 | humidity | 80.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 799 | 203.64 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 809 | 203.70 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 826 | 203.75 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 2 |
| 841 | 203.82 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 843 | 203.82 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 847 | 203.84 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 6 |
| 852 | 203.86 | wind | 3.0 | 10 | > th | dose independent | rect. | 24 | 4 |
| 867 | 203.92 | wind | 7.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 891 | 204.05 | radiation | 1.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 918 | 204.09 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 3 |
| 925 | 204.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 927 | 204.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 935 | 204.14 | wind | 5.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 954 | 204.16 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 960 | 204.16 | humidity | 90.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 975 | 204.19 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 1 |