Os05g0325200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0325200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.66 | 0.4 | 8.23 | -1.56 | 0.344 | -0.932 | 0.295 | -1.87 | 1.04 | 17.1 | 40.41 | 1365 | -- | -- |
| 77.35 | 0.41 | 8.21 | -1.34 | 0.348 | -1 | 0.343 | -- | 1.1 | 17.2 | 40 | 1353 | -- | -- |
| 72.82 | 0.397 | 8.23 | -1.56 | 0.349 | -0.941 | -- | -1.89 | 1.04 | 17.4 | 40.59 | 1352 | -- | -- |
| 77.62 | 0.41 | 8.21 | -1.34 | 0.351 | -1.01 | -- | -- | 1.11 | 17.3 | 40 | 1353 | -- | -- |
| 79.1 | 0.414 | 8.22 | -1.57 | -- | -0.976 | -- | -1.96 | 1.05 | -- | 40.86 | 1352 | -- | -- |
| 108.06 | 0.487 | 8.25 | -1.44 | 0.406 | -- | 0.589 | -- | 0.938 | 16 | -- | -- | -- | -- |
| 108.99 | 0.489 | 8.25 | -1.43 | 0.413 | -- | -- | -- | 0.941 | 16.3 | -- | -- | -- | -- |
| 84.15 | 0.427 | 8.21 | -1.35 | -- | -1.04 | -- | -- | 1.1 | -- | 40 | 1355 | -- | -- |
| 121.53 | 0.513 | 8.13 | -- | 0.332 | -1.02 | -- | -- | 1.37 | 18.3 | 20 | 1324 | -- | -- |
| 118.2 | 0.508 | 8.24 | -1.45 | -- | -- | -- | -- | 0.93 | -- | -- | -- | -- | -- |
| 163.03 | 0.597 | 8.21 | -- | 0.441 | -- | -- | -- | 1.1 | 16.2 | -- | -- | -- | -- |
| 128.29 | 0.528 | 8.15 | -- | -- | -0.99 | -- | -- | 1.33 | -- | 20 | 1342 | -- | -- |
| 173.53 | 0.615 | 8.21 | -- | -- | -- | -- | -- | 1.09 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.24 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 7 | 64.92 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 13 | 65.11 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 21 | 65.33 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 22 | 65.33 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 6 |
| 37 | 65.53 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 39 | 65.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 6 |
| 41 | 65.57 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 45 | 65.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 66 | 65.85 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 103 | 66.23 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 116 | 66.38 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 118 | 66.38 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 123 | 66.40 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 147 | 66.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 149 | 66.60 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 180 | 66.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 181 | 66.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 205 | 66.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 265 | 67.05 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 267 | 67.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 273 | 67.08 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 332 | 67.25 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 363 | 67.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 364 | 67.32 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 14 |
| 368 | 67.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 382 | 67.35 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 395 | 67.38 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 427 | 67.45 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 456 | 67.50 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 460 | 67.51 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 14 |
| 477 | 67.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 507 | 67.58 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 561 | 67.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 571 | 67.66 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 697 | 67.78 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 734 | 67.84 | temperature | 20.0 | 43200 | > th | dose independent | sin | 23 | NA |
| 773 | 67.90 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 807 | 67.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 810 | 67.96 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 866 | 67.99 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 876 | 68.00 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 885 | 68.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 932 | 68.06 | temperature | 20.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 943 | 68.07 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 963 | 68.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 12 |