Os05g0323800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os05g0323800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.84 | 0.577 | 9.92 | -0.932 | 2.59 | -1.49 | 0.288 | -0.484 | -0.866 | 9.87 | 21 | 1612 | -- | -- |
| 151.23 | 0.573 | 9.91 | -0.841 | 2.6 | -1.41 | 0.351 | -- | -0.833 | 9.86 | 21.1 | 1610 | -- | -- |
| 151.15 | 0.573 | 9.92 | -0.918 | 2.59 | -1.49 | -- | -0.484 | -0.865 | 9.88 | 21 | 1624 | -- | -- |
| 151.63 | 0.574 | 9.91 | -0.807 | 2.59 | -1.44 | -- | -- | -0.84 | 9.87 | 21 | 1619 | -- | -- |
| 495.26 | 1.04 | 9.97 | -0.966 | -- | -1.58 | -- | -0.247 | -0.756 | -- | 21.8 | 783 | -- | -- |
| 202.28 | 0.667 | 9.99 | -1.45 | 2.6 | -- | 0.346 | -- | -1.21 | 9.87 | -- | -- | -- | -- |
| 202.74 | 0.667 | 9.99 | -1.44 | 2.6 | -- | -- | -- | -1.21 | 9.87 | -- | -- | -- | -- |
| 411.14 | 0.944 | 10 | -0.976 | -- | -2.01 | -- | -- | -0.702 | -- | 25.1 | 761 | -- | -- |
| 166.34 | 0.601 | 9.87 | -- | 2.57 | -1.68 | -- | -- | -0.678 | 9.98 | 21.1 | 1684 | -- | -- |
| 606.83 | 1.15 | 10.1 | -1.46 | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
| 257.09 | 0.75 | 9.95 | -- | 2.6 | -- | -- | -- | -1.05 | 9.91 | -- | -- | -- | -- |
| 425.88 | 0.961 | 9.96 | -- | -- | -2.08 | -- | -- | -0.386 | -- | 24.9 | 719 | -- | -- |
| 663.4 | 1.2 | 10 | -- | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.71 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 136.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 3 | 138.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 4 | 138.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 5 | 138.65 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 12 | 140.12 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 13 | 140.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 14 | 140.56 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 20 | 141.24 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 32 | 142.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 35 | 142.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 36 | 142.90 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 45 | 143.46 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 46 | 143.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 47 | 143.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 49 | 143.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 50 | 143.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 52 | 143.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 53 | 143.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 54 | 143.71 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 55 | 143.76 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 59 | 144.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 66 | 144.60 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 67 | 144.66 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 68 | 144.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 69 | 144.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 71 | 144.78 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 73 | 144.85 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 81 | 145.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 83 | 145.49 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 86 | 145.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 87 | 145.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 89 | 145.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 93 | 146.07 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 96 | 146.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 100 | 146.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 104 | 146.32 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 114 | 146.62 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 124 | 147.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 127 | 147.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 129 | 147.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 140 | 147.44 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 144 | 147.51 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 152 | 147.70 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 171 | 148.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 180 | 148.19 | wind | 1.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 186 | 148.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 188 | 148.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 189 | 148.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 211 | 148.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 213 | 148.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 239 | 149.07 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 242 | 149.11 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 250 | 149.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 257 | 149.29 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 275 | 149.54 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 311 | 149.83 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 333 | 150.09 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 347 | 150.16 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 380 | 150.34 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 387 | 150.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 411 | 150.48 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 412 | 150.50 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 422 | 150.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 468 | 150.73 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 485 | 150.83 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 488 | 150.84 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 508 | 150.95 | radiation | 20.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 522 | 150.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 537 | 151.05 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 586 | 151.13 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 614 | 151.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 746 | 151.56 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 747 | 151.57 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 761 | 151.63 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 766 | 151.65 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 797 | 151.75 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 808 | 151.78 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 891 | 151.93 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 892 | 151.93 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 917 | 151.98 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 971 | 152.03 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 15 |