Os05g0322900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WRKY transcription factor 45.
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Os05g0322900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WRKY transcription factor 45.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.97 | 0.842 | 11.8 | 1.62 | 1.57 | -3.72 | -0.668 | -5.25 | 1.03 | 14 | 0.05998 | 4287 | 11.8 | -- |
| 340.87 | 0.86 | 11.8 | 1.25 | 1.76 | -2.75 | -1.17 | -- | 1.1 | 13.2 | 0.17 | 4218 | 8.7 | -- |
| 322.65 | 0.837 | 11.8 | 1.61 | 1.58 | -3.74 | -- | -5.3 | 1.02 | 14 | 0.06 | 4286 | 11.7 | -- |
| 344.18 | 0.864 | 11.8 | 1.15 | 1.72 | -2.65 | -- | -- | 1.08 | 13.6 | 0.1499 | 4247 | 8.72 | -- |
| 351.98 | 0.874 | 11.9 | 1.18 | -- | -4.56 | -- | -4.68 | 1.1 | -- | 0.06231 | 5014 | 13.6 | -- |
| 462.07 | 1.01 | 11.8 | 1.79 | 1.46 | -- | -1.07 | -- | 1.32 | 14.4 | -- | -- | -- | -- |
| 466.21 | 1.01 | 11.8 | 1.76 | 1.46 | -- | -- | -- | 1.31 | 14.4 | -- | -- | -- | -- |
| 349.6 | 0.871 | 11.9 | 0.918 | -- | -3.96 | -- | -- | 0.901 | -- | 0.1577 | 4999 | 12.4 | -- |
| 359.04 | 0.883 | 11.9 | -- | 1.56 | -3.04 | -- | -- | 0.758 | 14.3 | 0.04368 | 4281 | 11.2 | -- |
| 591.81 | 1.14 | 11.9 | 1.7 | -- | -- | -- | -- | 1.28 | -- | -- | -- | -- | -- |
| 547.84 | 1.09 | 11.9 | -- | 1.43 | -- | -- | -- | 1.12 | 14.4 | -- | -- | -- | -- |
| 358.66 | 0.882 | 12 | -- | -- | -4.27 | -- | -- | 0.747 | -- | 0.009889 | 4994 | 13.1 | -- |
| 667.87 | 1.21 | 11.9 | -- | -- | -- | -- | -- | 1.09 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 317.23 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 2 | 317.29 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 3 | 317.34 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 12 | 318.11 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 58 | 321.83 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 82 | 323.06 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 91 | 323.38 | radiation | 10 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 126 | 324.29 | radiation | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 129 | 324.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 130 | 324.46 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 137 | 324.57 | radiation | 10 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 156 | 324.87 | radiation | 10 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 159 | 324.91 | radiation | 10 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 191 | 325.08 | atmosphere | 1010 | 14400 | < th | dose independent | sin | 4 | NA |
| 201 | 325.21 | radiation | 10 | 43200 | < th | dose independent | sin | 20 | NA |
| 321 | 326.17 | atmosphere | 1010 | 14400 | > th | dose independent | sin | 4 | NA |
| 327 | 326.21 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 332 | 326.25 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 335 | 326.26 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 351 | 326.34 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 7 | NA |
| 355 | 326.35 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 19 | 16 |
| 361 | 326.39 | radiation | 10 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 373 | 326.40 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 13 |
| 374 | 326.40 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 15 |
| 383 | 326.41 | radiation | 40 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 433 | 326.67 | radiation | 10 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 449 | 326.79 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 535 | 326.92 | radiation | 20 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 539 | 326.95 | atmosphere | 1010 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 619 | 327.40 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 620 | 327.40 | atmosphere | 1010 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 696 | 327.61 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 697 | 327.62 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 762 | 327.85 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 780 | 327.87 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 832 | 328.13 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 4 | 17 |
| 853 | 328.17 | radiation | 10 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 864 | 328.18 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 876 | 328.22 | radiation | 10 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 943 | 328.34 | atmosphere | 1010 | 14400 | > th | dose independent | rect. | 19 | 17 |