Os05g0321600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0321600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.83 | 0.529 | 10.1 | 0.205 | 2.76 | 2.5 | -2.12 | -1.29 | 0.0133 | 21.7 | 19.28 | 295 | 24 | -- |
| 126.09 | 0.523 | 10.1 | 0.384 | 2.71 | 2.39 | -1.82 | -- | 0.0465 | 21.7 | 18.9 | 370 | 0.455 | -- |
| 134.86 | 0.541 | 10.1 | 0.535 | 3.32 | 2.77 | -- | 1.34 | 0.122 | 21.5 | 15.89 | 336 | 0.285 | -- |
| 137.85 | 0.547 | 10.1 | 0.392 | 3.14 | 2.74 | -- | -- | 0.0478 | 21.5 | 16.9 | 366 | 0.459 | -- |
| 215.68 | 0.688 | 9.95 | 0.931 | -- | -1.58 | -- | 2.38 | 0.478 | -- | -85.1 | 6983 | 20.2 | -- |
| 206.64 | 0.674 | 10 | 0.823 | 1.58 | -- | -2.2 | -- | 0.455 | 21.6 | -- | -- | -- | -- |
| 224.58 | 0.702 | 9.99 | 0.907 | 1.59 | -- | -- | -- | 0.46 | 21.5 | -- | -- | -- | -- |
| 201.69 | 0.661 | 9.99 | 0.499 | -- | 2.58 | -- | -- | 0.266 | -- | -142.5 | 2726 | 19.4 | -- |
| 141.62 | 0.554 | 10.2 | -- | 3.32 | 2.97 | -- | -- | -0.0279 | 21.4 | 16.61 | 364 | 0.542 | -- |
| 373.41 | 0.903 | 9.95 | 0.918 | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
| 246.28 | 0.734 | 10 | -- | 1.59 | -- | -- | -- | 0.359 | 21.5 | -- | -- | -- | -- |
| 205.23 | 0.667 | 10 | -- | -- | 2.88 | -- | -- | 0.165 | -- | -193 | 2789 | 20.1 | -- |
| 395.64 | 0.928 | 9.97 | -- | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 2 | 128.01 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 3 | 128.44 | temperature | 25 | 270 | < th | dose dependent | rect. | 4 | 6 |
| 14 | 132.03 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 20 | 132.71 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 7 |
| 21 | 132.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 39 | 135.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 40 | 135.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 75 | 137.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 91 | 137.86 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 6 |
| 151 | 139.94 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 171 | 140.48 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 9 |
| 218 | 141.23 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 321 | 143.14 | temperature | 25 | 270 | < th | dose independent | sin | 4 | NA |
| 324 | 143.23 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 358 | 143.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 414 | 144.93 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 444 | 145.34 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 451 | 145.47 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 519 | 146.35 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 570 | 146.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 654 | 148.09 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 16 |
| 909 | 151.03 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 949 | 151.37 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 20 |