Os05g0320800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0320800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.88 | 0.499 | 9.39 | -1.8 | 2.83 | 1.13 | 0.17 | -1.13 | -0.468 | 8.6 | 25.81 | 1617 | -- | -- |
| 113.24 | 0.496 | 9.35 | -1.53 | 2.83 | 1.05 | 0.224 | -- | -0.392 | 8.6 | 26.1 | 1647 | -- | -- |
| 112.96 | 0.495 | 9.39 | -1.8 | 2.83 | 1.13 | -- | -1.18 | -0.464 | 8.61 | 25.9 | 1613 | -- | -- |
| 113.3 | 0.496 | 9.35 | -1.51 | 2.82 | 1.01 | -- | -- | -0.394 | 8.61 | 25.95 | 1618 | -- | -- |
| 551.51 | 1.09 | 9.38 | -1.61 | -- | 0.845 | -- | -0.375 | -0.337 | -- | 28.74 | 5818 | -- | -- |
| 150.16 | 0.574 | 9.34 | -1.2 | 2.78 | -- | 0.155 | -- | -0.326 | 8.61 | -- | -- | -- | -- |
| 150.24 | 0.574 | 9.34 | -1.19 | 2.78 | -- | -- | -- | -0.326 | 8.6 | -- | -- | -- | -- |
| 537.35 | 1.08 | 9.39 | -1.37 | -- | 0.895 | -- | -- | -0.422 | -- | 33.9 | 7184 | -- | -- |
| 168.44 | 0.604 | 9.27 | -- | 2.87 | 0.883 | -- | -- | -0.0893 | 8.56 | 29.1 | 1801 | -- | -- |
| 584 | 1.13 | 9.41 | -1.18 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 187.61 | 0.641 | 9.31 | -- | 2.77 | -- | -- | -- | -0.193 | 8.64 | -- | -- | -- | -- |
| 587.06 | 1.13 | 9.4 | -- | -- | 0.694 | -- | -- | -0.234 | -- | 34 | 7196 | -- | -- |
| 620.86 | 1.16 | 9.38 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.43 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 7 | 111.00 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 8 | 111.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 12 | 111.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 15 | 111.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 42 | 111.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 45 | 111.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 66 | 112.24 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 67 | 112.24 | temperature | 25 | 1440 | > th | dose dependent | sin | 2 | NA |
| 72 | 112.32 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 110 | 112.66 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 147 | 113.06 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 156 | 113.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 158 | 113.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 166 | 113.16 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 183 | 113.28 | humidity | 60 | 10 | > th | dose dependent | sin | 19 | NA |
| 184 | 113.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 190 | 113.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 191 | 113.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 203 | 113.36 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 221 | 113.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 250 | 113.49 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 276 | 113.55 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 287 | 113.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 291 | 113.59 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 296 | 113.60 | temperature | 20 | 10 | > th | dose dependent | sin | 19 | NA |
| 312 | 113.66 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 317 | 113.68 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 336 | 113.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 418 | 113.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 424 | 113.96 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 443 | 114.01 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 532 | 114.28 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 586 | 114.40 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 588 | 114.40 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 606 | 114.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 648 | 114.60 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 663 | 114.71 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 12 |
| 666 | 114.73 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 733 | 114.93 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 736 | 114.94 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 776 | 114.98 | temperature | 10 | 10 | > th | dose dependent | sin | 20 | NA |
| 782 | 115.00 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 786 | 115.01 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 797 | 115.04 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 823 | 115.06 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 20 |
| 906 | 115.29 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 924 | 115.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 939 | 115.41 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 954 | 115.45 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 959 | 115.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 19 |
| 962 | 115.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 965 | 115.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 968 | 115.48 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |