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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0317400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.89 (0.0205) R2 : 0.0156
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.116 (0.0432) R2dN8 : 0.0201 R2N8 : 0.0156
σ : 0.386
deviance : 68.42
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.99 0.385 2.89 -0.05 0.177 0.127 -0.212 -0.125 0.0842 3.87 89.82 306 -- --
67.03 0.381 2.89 -0.0396 0.179 0.129 -0.141 -- 0.0849 3.9 89.79 323 -- --
67.08 0.381 2.89 -0.0369 0.181 0.136 -- -0.0342 0.0859 3.9 89.02 323 -- --
67.09 0.381 2.89 -0.0367 0.182 0.135 -- -- 0.0851 3.96 89.66 323 -- --
67.74 0.383 2.89 -0.0503 -- 0.167 -- -0.188 0.0923 -- 89 1156 -- --
67.62 0.386 2.89 -0.0657 0.101 -- -0.19 -- 0.106 2.76 -- -- -- --
67.75 0.385 2.89 -0.0611 0.1 -- -- -- 0.107 2.73 -- -- -- --
67.79 0.383 2.89 -0.0417 -- 0.13 -- -- 0.0931 -- 87.99 1162 -- --
67.12 0.382 2.89 -- 0.184 0.139 -- -- 0.0884 3.98 89.67 323 -- --
68.33 0.386 2.89 -0.0569 -- -- -- -- 0.11 -- -- -- -- --
67.85 0.385 2.89 -- 0.0989 -- -- -- 0.114 2.72 -- -- -- --
67.79 0.383 2.89 -- -- 0.172 -- -- 0.0943 -- 87.9 1151 -- --
68.42 0.386 2.89 -- -- -- -- -- 0.116 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 60.96 wind 3.0 30 < th dose dependent rect. 2 1
2 61.00 temperature 20.0 30 > th dose dependent rect. 2 1
3 61.06 wind 1.0 30 < th dose independent rect. 2 1
4 61.08 humidity 90.0 30 > th dose independent rect. 2 1
6 61.20 atmosphere 1005.0 30 > th dose dependent rect. 2 1
12 61.34 humidity 80.0 30 > th dose dependent rect. 2 1
17 61.43 atmosphere 1005.0 30 > th dose independent rect. 2 1
19 61.45 temperature 20.0 30 > th dose independent rect. 2 1
25 61.46 temperature 10.0 30 > th dose independent rect. 2 1
27 61.46 temperature 30.0 30 < th dose independent rect. 2 1
28 61.46 humidity 50.0 30 > th dose independent rect. 2 1
32 61.46 atmosphere 1010.0 30 < th dose independent rect. 2 1
34 61.46 radiation 1.0 30 < th dose independent rect. 2 1
39 61.46 precipitation 0.1 30 < th dose independent rect. 2 1
40 61.46 temperature 10.0 30 > th dose independent rect. 3 23
41 61.46 radiation 1.0 30 < th dose dependent rect. 2 1
46 61.46 precipitation 0.1 30 < th dose dependent rect. 2 1
49 61.72 wind 3.0 90 > th dose independent rect. 24 2
50 61.73 wind 3.0 10 > th dose independent rect. 1 1
52 61.74 atmosphere 1015.0 30 < th dose dependent rect. 2 1
54 61.80 wind 9.0 30 < th dose independent rect. 3 23
58 62.00 temperature 30.0 30 < th dose dependent rect. 2 1
78 62.79 humidity 90.0 90 < th dose independent rect. 1 1
91 63.02 humidity 80.0 270 < th dose dependent rect. 22 2
122 63.24 humidity 80.0 270 < th dose independent rect. 23 2
146 63.81 humidity 90.0 10 < th dose independent rect. 2 1
207 64.90 wind 1.0 90 > th dose dependent rect. 1 1
208 64.91 wind 7.0 1440 < th dose independent rect. 3 1
213 64.98 radiation 1.0 43200 < th dose dependent rect. 2 2
217 64.99 temperature 10.0 1440 > th dose independent rect. 3 1
220 64.99 temperature 30.0 1440 < th dose independent rect. 3 1
224 64.99 humidity 50.0 1440 > th dose independent rect. 3 1
233 64.99 atmosphere 995.0 1440 > th dose independent rect. 3 1
234 64.99 radiation 1.0 1440 < th dose independent rect. 3 1
293 64.99 temperature 10.0 1440 > th dose independent rect. 4 22
299 64.99 radiation 1.0 1440 < th dose dependent rect. 3 1
387 65.24 atmosphere 1015.0 1440 < th dose independent rect. 3 1
403 65.24 atmosphere 995.0 90 > th dose independent rect. 3 22
417 65.27 precipitation 0.1 30 < th dose independent rect. 3 22
419 65.27 precipitation 0.1 30 < th dose dependent rect. 3 22
472 65.41 humidity 50.0 30 > th dose independent rect. 3 22
513 65.61 wind 1.0 30 < th dose independent rect. 24 3
516 65.63 temperature 25.0 90 > th dose independent rect. 20 1
548 65.70 wind 1.0 720 > th dose independent rect. 14 7
586 65.79 humidity 90.0 90 < th dose independent rect. 1 20
587 65.79 temperature 20.0 90 > th dose dependent rect. 20 1
591 65.80 humidity 80.0 720 > th dose independent rect. 21 3
596 65.81 wind 1.0 10 > th dose independent rect. 12 13
602 65.83 precipitation 0.1 720 < th dose independent rect. 9 17
605 65.83 precipitation 0.1 720 < th dose dependent rect. 9 17
607 65.85 precipitation 0.1 720 < th dose independent rect. 14 7
611 65.85 precipitation 0.1 720 < th dose dependent rect. 14 7
647 65.90 temperature 30.0 30 < th dose independent rect. 3 22
651 65.91 atmosphere 1015.0 30 < th dose independent rect. 3 22
655 65.92 wind 1.0 90 > th dose independent rect. 3 22
667 65.95 temperature 10.0 720 > th dose independent rect. 14 7
668 65.95 wind 1.0 10 > th dose independent rect. 14 11
669 65.95 temperature 10.0 720 > th dose independent rect. 21 17
670 65.95 atmosphere 995.0 720 > th dose independent rect. 21 17
681 65.97 wind 9.0 720 < th dose independent rect. 2 7
682 65.97 temperature 10.0 720 > th dose independent rect. 2 7
683 65.97 temperature 20.0 10 > th dose independent rect. 20 7
685 65.97 humidity 50.0 720 > th dose independent rect. 2 7
686 65.97 atmosphere 995.0 720 > th dose independent rect. 2 7
688 65.97 humidity 50.0 10 > th dose independent rect. 1 11
689 65.97 precipitation 0.1 10 < th dose independent rect. 1 11
690 65.97 temperature 10.0 720 > th dose independent rect. 9 17
695 65.97 precipitation 0.1 10 < th dose dependent rect. 1 11
696 65.98 wind 9.0 10 < th dose independent rect. 1 11
697 65.98 wind 1.0 10 > th dose independent rect. 3 22
710 66.00 humidity 80.0 90 > th dose independent rect. 20 1
720 66.02 atmosphere 1015.0 720 < th dose independent rect. 14 7
721 66.02 temperature 20.0 10 > th dose independent rect. 1 11
724 66.03 humidity 50.0 720 > th dose independent rect. 21 17
743 66.04 precipitation 0.1 720 < th dose independent rect. 9 8
744 66.04 precipitation 0.1 10 < th dose independent rect. 1 13
751 66.04 precipitation 0.1 720 < th dose dependent rect. 9 8
752 66.04 precipitation 0.1 10 < th dose dependent rect. 1 13
758 66.05 temperature 10.0 10 > th dose independent rect. 1 11
762 66.05 atmosphere 995.0 10 > th dose independent rect. 1 11
764 66.05 atmosphere 1015.0 10 < th dose independent rect. 1 11
766 66.05 temperature 10.0 10 > th dose independent rect. 12 13
771 66.06 temperature 10.0 1440 > th dose independent rect. 21 1
774 66.06 temperature 30.0 1440 < th dose independent rect. 21 1
778 66.06 humidity 50.0 1440 > th dose independent rect. 21 1
784 66.06 atmosphere 995.0 1440 > th dose independent rect. 21 1
785 66.06 radiation 1.0 1440 < th dose independent rect. 21 1
808 66.06 temperature 10.0 1440 > th dose independent rect. 2 11
811 66.06 atmosphere 995.0 1440 > th dose independent rect. 2 11
812 66.06 wind 9.0 30 < th dose independent rect. 12 13
813 66.06 temperature 10.0 1440 > th dose independent rect. 13 13
816 66.06 precipitation 0.1 10 < th dose independent rect. 12 13
819 66.06 temperature 10.0 1440 > th dose independent rect. 22 23
825 66.06 precipitation 0.1 10 < th dose dependent rect. 12 13
827 66.07 atmosphere 1005.0 30 > th dose independent rect. 20 1
833 66.07 radiation 40.0 720 < th dose independent rect. 15 6
836 66.07 wind 9.0 10 < th dose independent rect. 1 13
838 66.07 atmosphere 1000.0 30 > th dose dependent rect. 20 1
840 66.07 radiation 10.0 1440 < th dose dependent rect. 21 1
844 66.08 wind 5.0 30 < th dose independent rect. 20 1
848 66.08 humidity 90.0 30 < th dose independent rect. 20 1
851 66.08 atmosphere 995.0 10 > th dose independent rect. 12 13
857 66.08 radiation 40.0 14400 < th dose dependent rect. 21 1
860 66.09 wind 1.0 30 > th dose independent rect. 20 1
863 66.09 temperature 10.0 30 > th dose independent rect. 20 1
866 66.09 temperature 30.0 30 < th dose independent rect. 20 1
867 66.09 humidity 50.0 30 > th dose independent rect. 20 1
871 66.09 atmosphere 1010.0 30 < th dose independent rect. 20 1
873 66.09 radiation 1.0 30 < th dose independent rect. 20 1
878 66.09 precipitation 0.1 30 < th dose independent rect. 20 1
885 66.09 temperature 10.0 720 > th dose independent rect. 9 8
887 66.09 atmosphere 1015.0 720 < th dose independent rect. 9 8
889 66.09 wind 9.0 720 < th dose independent rect. 17 16
890 66.09 temperature 10.0 720 > th dose independent rect. 17 16
893 66.09 temperature 10.0 30 > th dose independent rect. 21 23
894 66.09 wind 7.0 30 < th dose dependent rect. 20 1
900 66.09 humidity 50.0 30 > th dose dependent rect. 20 1
902 66.09 radiation 1.0 30 < th dose dependent rect. 20 1
912 66.09 precipitation 0.1 30 < th dose dependent rect. 20 1
935 66.10 temperature 30.0 720 < th dose independent rect. 2 7
936 66.10 precipitation 0.1 720 < th dose independent rect. 2 7
937 66.10 radiation 40.0 30 < th dose independent rect. 14 11
941 66.10 wind 1.0 30 > th dose dependent rect. 20 1
951 66.10 precipitation 0.1 720 < th dose dependent rect. 2 7
952 66.11 wind 1.0 10 < th dose independent rect. 22 1
969 66.11 wind 1.0 10 < th dose independent rect. 22 5
973 66.11 humidity 50.0 10 > th dose independent rect. 1 13
975 66.11 atmosphere 995.0 720 > th dose independent rect. 17 16
979 66.11 wind 1.0 10 < th dose dependent rect. 22 1
981 66.11 humidity 90.0 30 < th dose dependent rect. 20 1
992 66.12 temperature 10.0 10 > th dose independent rect. 14 11
994 66.12 temperature 10.0 10 > th dose independent rect. 1 13
996 66.12 atmosphere 995.0 10 > th dose independent rect. 1 13
997 66.12 atmosphere 1015.0 10 < th dose independent rect. 1 13
998 66.12 atmosphere 1015.0 30 < th dose dependent rect. 20 1