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Os05g0316200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0184) R2 : 0.118
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.302 (0.0387) R2dN8 : 0.152 R2N8 : 0.118
σ : 0.346
deviance : 55.03
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.4 0.263 10.8 0.824 0.157 0.0861 -0.0949 -1.28 0.4 5.83 1.2 1504 -- --
33.36 0.271 10.8 0.851 0.11 0.082 -0.38 -- 0.393 7.93 3.802 4433 -- --
31.42 0.261 10.8 0.824 0.158 0.0855 -- -1.3 0.4 5.6 1.201 1504 -- --
33.68 0.272 10.8 0.846 0.131 0.0581 -- -- 0.393 6.48 3.802 4433 -- --
32.64 0.266 10.8 0.832 -- 0.101 -- -1.29 0.407 -- 1.2 1261 -- --
33.65 0.272 10.8 0.867 0.162 -- -0.324 -- 0.394 6.61 -- -- -- --
33.86 0.272 10.8 0.861 0.164 -- -- -- 0.394 5.92 -- -- -- --
34.3 0.274 10.8 0.834 -- 0.11 -- -- 0.392 -- 3.712 13410 -- --
39.56 0.293 10.9 -- 0.163 0.677 -- -- 0.16 6.08 5.2 47520 -- --
35.25 0.277 10.8 0.866 -- -- -- -- 0.398 -- -- -- -- --
53.39 0.342 10.8 -- 0.177 -- -- -- 0.299 5.69 -- -- -- --
40.85 0.298 10.9 -- -- 0.67 -- -- 0.16 -- 5.51 47520 -- --
55.03 0.346 10.8 -- -- -- -- -- 0.302 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.26 wind 3.0 1440 < th dose dependent rect. 5 2
2 29.72 wind 1.0 1440 > th dose independent rect. 3 4
3 29.74 wind 1.0 1440 < th dose independent rect. 3 4
12 30.12 wind 1.0 1440 < th dose independent rect. 5 2
19 30.22 wind 1.0 1440 < th dose independent rect. 3 10
30 30.36 wind 9.0 43200 < th dose independent rect. 17 3
31 30.36 wind 9.0 14400 > th dose dependent rect. 17 3
32 30.37 wind 7.0 43200 > th dose independent rect. 18 2
33 30.37 wind 1.0 1440 > th dose independent rect. 3 10
34 30.37 wind 5.0 4320 > th dose dependent rect. 9 1
37 30.38 wind 5.0 4320 > th dose independent rect. 8 2
41 30.39 wind 1.0 1440 > th dose dependent rect. 5 2
45 30.40 wind 1.0 1440 < th dose independent rect. 3 7
67 30.48 wind 1.0 1440 < th dose dependent rect. 5 8
75 30.49 wind 1.0 1440 < th dose dependent rect. 3 10
80 30.50 humidity 70.0 43200 > th dose dependent rect. 17 6
88 30.51 humidity 70.0 43200 > th dose dependent rect. 16 8
93 30.52 wind 5.0 4320 < th dose independent rect. 8 2
101 30.54 wind 9.0 14400 > th dose independent rect. 20 2
102 30.54 wind 7.0 14400 > th dose dependent rect. 20 2
118 30.57 wind 7.0 14400 < th dose independent rect. 20 2
123 30.58 humidity 80.0 43200 > th dose independent rect. 1 21
149 30.62 humidity 80.0 43200 < th dose independent rect. 24 21
163 30.65 humidity 80.0 43200 < th dose independent sin 17 NA
180 30.67 humidity 80.0 43200 > th dose independent sin 17 NA
183 30.67 humidity 80.0 43200 < th dose independent rect. 12 13
184 30.67 humidity 80.0 43200 < th dose independent rect. 9 18
205 30.69 humidity 80.0 43200 > th dose independent rect. 8 19
225 30.70 humidity 70.0 43200 > th dose dependent sin 16 NA
228 30.71 humidity 70.0 1440 > th dose independent rect. 17 1
231 30.71 temperature 20.0 10 > th dose independent rect. 20 16
240 30.72 humidity 80.0 43200 > th dose independent rect. 11 16
249 30.73 wind 9.0 14400 > th dose independent rect. 20 6
257 30.73 humidity 80.0 43200 > th dose independent rect. 12 14
285 30.74 humidity 70.0 43200 > th dose dependent rect. 16 22
289 30.75 humidity 80.0 43200 < th dose independent rect. 13 11
303 30.75 humidity 70.0 43200 > th dose dependent rect. 12 23
308 30.76 humidity 80.0 43200 > th dose independent rect. 24 18
319 30.76 humidity 70.0 43200 > th dose dependent rect. 1 23
336 30.77 humidity 70.0 43200 > th dose dependent no NA NA
344 30.77 humidity 70.0 43200 > th dose dependent rect. 23 23
370 30.78 humidity 70.0 43200 > th dose dependent rect. 9 23
393 30.80 humidity 80.0 43200 > th dose independent rect. 2 13
424 30.81 humidity 80.0 43200 > th dose independent rect. 1 15
428 30.81 humidity 80.0 43200 < th dose independent rect. 24 18
431 30.81 wind 1.0 1440 < th dose independent rect. 3 22
446 30.82 humidity 80.0 43200 > th dose independent sin 3 NA
453 30.82 wind 1.0 1440 > th dose independent rect. 3 22
510 30.84 precipitation 0.1 4320 < th dose independent rect. 17 1
514 30.84 humidity 80.0 43200 < th dose independent rect. 1 14
524 30.84 humidity 80.0 43200 > th dose dependent rect. 21 1
525 30.84 precipitation 0.1 4320 < th dose dependent rect. 17 1
527 30.84 humidity 80.0 43200 > th dose dependent rect. 20 4
546 30.85 wind 9.0 4320 < th dose independent rect. 6 4
559 30.85 wind 9.0 14400 > th dose dependent rect. 20 6
598 30.87 wind 9.0 14400 < th dose independent rect. 20 6
639 30.89 humidity 80.0 43200 < th dose independent sin 3 NA
645 30.89 temperature 20.0 10 > th dose independent rect. 20 18
649 30.89 humidity 70.0 43200 > th dose dependent sin 5 NA
657 30.89 wind 1.0 1440 < th dose dependent rect. 3 21
683 30.91 humidity 80.0 43200 > th dose independent no NA NA
690 30.91 humidity 90.0 1440 > th dose dependent rect. 20 1
709 30.92 atmosphere 1000.0 270 > th dose independent rect. 17 15
728 30.93 wind 1.0 1440 < th dose independent sin 4 NA
750 30.93 atmosphere 1005.0 10 > th dose dependent rect. 17 6
754 30.93 humidity 70.0 43200 > th dose dependent rect. 2 10
755 30.93 humidity 70.0 43200 > th dose dependent rect. 1 12
766 30.94 humidity 80.0 43200 < th dose independent no NA NA
767 30.94 wind 1.0 14400 > th dose independent rect. 24 1
851 30.97 radiation 1.0 1440 > th dose independent rect. 9 6
942 30.99 wind 1.0 1440 < th dose dependent sin 3 NA
986 31.01 atmosphere 1005.0 720 > th dose independent rect. 23 1
998 31.01 radiation 1.0 14400 < th dose dependent rect. 21 1