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Os05g0298200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.76 (0.0293) R2 : 0.86
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.88 (0.113) R2dC : 1.82 R2C : 0.0821
β3 : 3.33 (0.0974) R2dE : 0.775 R2E : -0.972
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.201 (0.0617) R2dN8 : 0.00431 R2N8 : 0.000651
σ : 0.55
deviance : 139.52
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C
peak time of C : 17.5
E
wheather : radiation
threshold : 0.2802
memory length : 293
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 4.31
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
129.29 0.534 9.75 0.616 5.85 3.28 0.528 0.398 -0.141 17.5 0.25 287 4.15 --
129.62 0.53 9.75 0.612 5.86 3.29 0.197 -- -0.14 17.5 0.25 287 4.15 --
129.67 0.53 9.75 0.606 5.86 3.3 -- 0.102 -0.143 17.5 0.25 289 4.2 --
129.7 0.53 9.75 0.607 5.88 3.31 -- -- -0.14 17.5 0.25 289 4.2 --
703.74 1.24 9.66 0.514 -- 1.84 -- 0.312 -0.222 -- 1.316 1536 7.34 --
178.58 0.626 9.76 0.548 3.85 -- 0.422 -- -0.191 19.9 -- -- -- --
179.1 0.627 9.76 0.537 3.85 -- -- -- -0.19 19.9 -- -- -- --
190.22 0.642 9.66 0.564 -- 4.14 -- -- -0.135 -- 465.3 2002 14.9 --
139.52 0.55 9.76 -- 5.88 3.33 -- -- -0.201 17.5 0.2802 293 4.31 --
982.4 1.46 9.66 0.494 -- -- -- -- -0.243 -- -- -- -- --
186.7 0.639 9.77 -- 3.84 -- -- -- -0.25 19.9 -- -- -- --
189.87 0.642 9.61 -- -- 4.06 -- -- -0.18 -- 974 2110 15.8 --
988.83 1.47 9.67 -- -- -- -- -- -0.297 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 118.01 radiation 20.0 270 < th dose independent rect. 17 16
2 118.88 wind 9.0 270 < th dose independent rect. 23 16
3 119.42 radiation 40.0 270 < th dose dependent rect. 17 16
4 119.53 precipitation 0.1 270 < th dose independent rect. 3 8
5 119.53 precipitation 0.1 270 < th dose dependent rect. 3 8
6 119.71 temperature 30.0 270 < th dose independent rect. 3 8
7 119.86 radiation 1.0 270 < th dose dependent rect. 21 9
8 119.93 wind 9.0 270 < th dose independent rect. 11 16
10 120.35 wind 9.0 270 < th dose independent rect. 9 8
11 120.76 temperature 10.0 270 > th dose independent rect. 15 8
12 120.76 temperature 10.0 270 > th dose independent rect. 23 16
13 120.84 humidity 50.0 270 > th dose independent rect. 3 8
14 120.88 radiation 40.0 270 < th dose independent rect. 15 8
16 121.05 temperature 10.0 270 > th dose independent rect. 3 8
17 121.05 atmosphere 995.0 270 > th dose independent rect. 3 8
18 121.05 atmosphere 1015.0 270 < th dose independent rect. 3 8
19 121.05 temperature 10.0 270 > th dose independent rect. 11 16
20 121.32 atmosphere 995.0 270 > th dose independent rect. 23 16
21 121.34 radiation 1.0 270 < th dose independent rect. 21 9
22 121.35 precipitation 0.1 270 < th dose independent rect. 11 16
23 121.35 precipitation 0.1 270 < th dose dependent rect. 11 16
24 121.49 temperature 15.0 270 > th dose independent rect. 9 8
26 121.58 wind 1.0 270 > th dose independent rect. 9 8
28 121.77 wind 9.0 270 < th dose independent rect. 3 8
29 121.86 wind 9.0 270 < th dose independent rect. 15 8
31 121.99 humidity 50.0 270 > th dose independent rect. 17 16
32 122.02 precipitation 0.1 270 < th dose independent rect. 9 8
33 122.02 precipitation 0.1 270 < th dose dependent rect. 9 8
36 122.21 atmosphere 1015.0 270 < th dose independent rect. 9 8
37 122.21 temperature 10.0 270 > th dose independent rect. 17 16
39 122.27 wind 1.0 270 > th dose independent rect. 15 8
42 122.50 wind 9.0 270 < th dose independent rect. 17 16
44 122.70 radiation 1.0 90 < th dose independent rect. 23 17
45 122.90 atmosphere 995.0 270 > th dose independent rect. 17 16
48 123.09 precipitation 0.1 270 < th dose independent rect. 23 16
49 123.09 precipitation 0.1 270 < th dose dependent rect. 23 16
51 123.14 atmosphere 1015.0 270 < th dose independent rect. 23 16
53 123.26 precipitation 0.1 270 < th dose independent rect. 17 16
54 123.26 precipitation 0.1 270 < th dose dependent rect. 17 16
59 123.68 humidity 50.0 270 > th dose dependent rect. 4 7
61 123.77 wind 9.0 270 < th dose independent rect. 21 8
68 123.79 radiation 1.0 90 < th dose dependent rect. 23 17
71 123.81 temperature 10.0 270 > th dose independent rect. 21 8
72 123.81 temperature 30.0 270 < th dose independent rect. 21 8
73 123.81 humidity 50.0 270 > th dose independent rect. 21 8
76 123.81 atmosphere 995.0 270 > th dose independent rect. 21 8
80 123.81 temperature 10.0 270 > th dose independent rect. 5 16
81 123.87 atmosphere 1015.0 270 < th dose independent rect. 5 16
87 124.06 radiation 1.0 270 < th dose dependent rect. 21 17
89 124.13 wind 1.0 270 > th dose independent rect. 10 6
91 124.22 precipitation 0.1 270 < th dose independent rect. 15 8
92 124.22 precipitation 0.1 270 < th dose dependent rect. 15 8
97 124.67 temperature 15.0 270 > th dose independent rect. 10 6
103 124.86 atmosphere 995.0 270 > th dose independent rect. 15 8
105 124.98 humidity 70.0 270 > th dose independent rect. 4 6
128 125.79 radiation 10.0 90 < th dose dependent rect. 23 8
134 126.05 temperature 30.0 90 < th dose independent rect. 17 18
135 126.06 radiation 40.0 270 < th dose independent rect. 3 8
140 126.22 radiation 1.0 90 < th dose independent rect. 23 8
147 126.40 precipitation 0.1 270 < th dose independent rect. 21 8
149 126.40 precipitation 0.1 270 < th dose dependent rect. 21 8
154 126.59 atmosphere 1015.0 270 < th dose independent rect. 15 8
167 126.75 radiation 40.0 270 < th dose dependent rect. 15 7
175 126.96 precipitation 0.1 270 < th dose independent rect. 5 16
176 126.96 precipitation 0.1 270 < th dose dependent rect. 5 16
182 127.05 humidity 50.0 270 > th dose independent rect. 23 16
184 127.14 wind 9.0 270 < th dose independent rect. 5 16
191 127.25 atmosphere 995.0 270 > th dose independent rect. 9 8
193 127.30 atmosphere 995.0 270 > th dose independent rect. 10 6
233 127.93 humidity 90.0 270 < th dose independent rect. 9 8
245 128.21 radiation 40.0 270 < th dose independent rect. 5 17
248 128.32 wind 9.0 270 < th dose independent rect. 16 6
256 128.47 humidity 90.0 270 < th dose independent rect. 10 6
264 128.58 radiation 1.0 270 < th dose independent rect. 21 17
293 129.06 atmosphere 995.0 270 > th dose independent rect. 16 6
295 129.10 radiation 40.0 270 < th dose dependent rect. 5 5
304 129.31 humidity 50.0 270 > th dose independent rect. 15 8
317 129.57 atmosphere 1015.0 270 < th dose independent rect. 16 6
322 129.61 radiation 40.0 270 < th dose dependent rect. 5 17
340 129.84 temperature 10.0 270 > th dose independent rect. 22 6
341 129.84 temperature 30.0 270 < th dose independent rect. 22 6
342 129.84 humidity 50.0 270 > th dose independent rect. 22 6
345 129.84 atmosphere 995.0 270 > th dose independent rect. 22 6
351 129.84 temperature 10.0 270 > th dose independent rect. 4 18
380 129.94 precipitation 0.1 270 < th dose independent rect. 16 6
382 129.94 precipitation 0.1 270 < th dose dependent rect. 16 6
412 130.19 atmosphere 995.0 270 > th dose independent rect. 5 16
423 130.32 radiation 10.0 10 < th dose dependent rect. 23 18
432 130.46 atmosphere 995.0 270 > th dose independent rect. 11 16
433 130.47 radiation 1.0 270 > th dose independent rect. 9 8
438 130.54 radiation 1.0 270 > th dose independent rect. 10 6
473 131.17 precipitation 0.1 270 < th dose independent rect. 22 6
474 131.17 precipitation 0.1 270 < th dose dependent rect. 22 6
482 131.25 radiation 1.0 270 < th dose dependent sin 10 NA
485 131.34 humidity 50.0 270 > th dose independent rect. 16 6
521 131.76 radiation 1.0 90 > th dose independent rect. 4 7
550 131.97 humidity 50.0 270 > th dose dependent rect. 21 8
563 132.21 radiation 10.0 270 < th dose independent rect. 5 17
568 132.28 wind 9.0 270 < th dose independent rect. 4 18
570 132.33 radiation 1.0 90 < th dose dependent sin 6 NA
575 132.36 radiation 10.0 10 < th dose dependent sin 6 NA
587 132.56 humidity 70.0 270 > th dose independent rect. 4 17
656 133.14 atmosphere 1015.0 270 < th dose independent rect. 17 17
672 133.25 atmosphere 995.0 270 > th dose independent rect. 10 18
681 133.31 radiation 1.0 90 > th dose independent sin 6 NA
683 133.34 radiation 1.0 90 < th dose independent sin 6 NA
708 133.65 wind 1.0 270 > th dose independent rect. 22 7
720 133.66 humidity 90.0 270 < th dose independent rect. 11 4
736 133.78 atmosphere 995.0 270 > th dose independent rect. 4 18
756 133.89 wind 1.0 270 > th dose independent rect. 11 16
768 133.94 wind 9.0 90 < th dose independent rect. 1 16
794 134.09 humidity 50.0 270 > th dose independent rect. 10 6
844 134.55 atmosphere 1015.0 270 < th dose independent rect. 22 6
865 134.72 radiation 10.0 10 < th dose dependent rect. 23 9
944 135.23 atmosphere 1015.0 270 < th dose independent rect. 21 8
986 135.45 humidity 50.0 270 > th dose independent rect. 17 4