Os05g0297900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Signal peptidase 18 subunit (Fragment).
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Os05g0297900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Signal peptidase 18 subunit (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.89 | 0.37 | 7.88 | 0.0243 | 1.06 | -1.92 | -0.166 | 0.521 | -0.0381 | 16.2 | 23.85 | 2709 | -- | -- |
| 62.06 | 0.367 | 7.86 | 0.108 | 1.06 | -2.02 | -0.189 | -- | -0.00759 | 16.2 | 23.41 | 2733 | -- | -- |
| 61.91 | 0.366 | 7.88 | 0.028 | 1.05 | -1.96 | -- | 0.423 | -0.0302 | 16.3 | 23.62 | 2762 | -- | -- |
| 62.07 | 0.367 | 7.86 | 0.0932 | 1.05 | -2.05 | -- | -- | -0.00814 | 16.3 | 23.36 | 2762 | -- | -- |
| 75.25 | 0.404 | 7.88 | 0.0233 | -- | -2.46 | -- | 2.27 | -0.027 | -- | 32.51 | 239 | -- | -- |
| 126.84 | 0.528 | 7.76 | 0.971 | 0.959 | -- | 0.144 | -- | 0.472 | 16.5 | -- | -- | -- | -- |
| 126.89 | 0.528 | 7.76 | 0.972 | 0.96 | -- | -- | -- | 0.473 | 16.4 | -- | -- | -- | -- |
| 79.49 | 0.415 | 7.84 | 0.395 | -- | -2.35 | -- | -- | 0.0429 | -- | 31.14 | 249 | -- | -- |
| 62.23 | 0.367 | 7.86 | -- | 1.05 | -2.1 | -- | -- | -0.0146 | 16.3 | 23.18 | 2798 | -- | -- |
| 176.21 | 0.62 | 7.75 | 0.934 | -- | -- | -- | -- | 0.447 | -- | -- | -- | -- | -- |
| 151.79 | 0.576 | 7.78 | -- | 0.941 | -- | -- | -- | 0.364 | 16.5 | -- | -- | -- | -- |
| 83.31 | 0.425 | 7.85 | -- | -- | -2.47 | -- | -- | -0.022 | -- | 30.97 | 252 | -- | -- |
| 199.24 | 0.659 | 7.77 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 31 | 63.36 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 34 | 63.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 38 | 63.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 41 | 63.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 72 | 63.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 177 | 64.13 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 181 | 64.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 8 |
| 185 | 64.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 231 | 64.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 8 |
| 235 | 64.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 265 | 64.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 8 |
| 275 | 64.48 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 277 | 64.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 281 | 64.51 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 324 | 64.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 351 | 64.74 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 377 | 64.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 12 |
| 398 | 64.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 400 | 64.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 415 | 64.92 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 454 | 65.00 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 474 | 65.03 | temperature | 25 | 4320 | < th | dose dependent | rect. | 11 | 19 |
| 507 | 65.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 576 | 65.31 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 685 | 65.49 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 690 | 65.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 711 | 65.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 23 |
| 712 | 65.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 726 | 65.54 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 737 | 65.55 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 826 | 65.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 19 |
| 847 | 65.76 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 19 |
| 899 | 65.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 1 |