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Os05g0295200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0169) R2 : 0.752
β1 : -0.858 (0.0619) R2dD : 0.108 R2D : 0.0603
β2 : 1.5 (0.0441) R2dC : 0.628 R2C : 0.587
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.4 (0.0361) R2dN8 : 0.0895 R2N8 : 0.0237
σ : 0.318
deviance : 46.12
__
_____
C
peak time of C : 6.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.42 0.295 11.7 -0.842 1.34 -0.718 0.601 -0.115 -0.336 6.81 40.76 319 -- --
39.43 0.292 11.7 -0.84 1.34 -0.72 0.608 -- -0.336 6.81 40.76 319 -- --
40.3 0.296 11.7 -0.829 1.33 -0.695 -- -0.241 -0.337 6.77 40.73 333 -- --
40.36 0.296 11.7 -0.825 1.33 -0.695 -- -- -0.334 6.77 40.73 335 -- --
93.84 0.451 11.7 -0.798 -- -1.22 -- 0.29 -0.209 -- 41.19 668 -- --
45.21 0.315 11.7 -0.865 1.49 -- 0.609 -- -0.398 6.34 -- -- -- --
46.12 0.318 11.7 -0.858 1.5 -- -- -- -0.4 6.3 -- -- -- --
93.02 0.449 11.7 -0.677 -- -1.24 -- -- -0.155 -- 40.69 668 -- --
58.06 0.355 11.7 -- 1.31 -0.641 -- -- -0.259 6.68 40 409 -- --
162.24 0.595 11.8 -0.818 -- -- -- -- -0.368 -- -- -- -- --
65.51 0.379 11.7 -- 1.48 -- -- -- -0.305 6.34 -- -- -- --
104.9 0.477 11.7 -- -- -1.36 -- -- -0.103 -- 40.02 616 -- --
179.89 0.626 11.7 -- -- -- -- -- -0.277 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.47 temperature 30.0 90 < th dose independent rect. 5 8
2 34.11 radiation 40.0 270 < th dose independent rect. 3 8
3 34.39 radiation 40.0 270 < th dose independent rect. 3 21
4 34.43 temperature 30.0 270 < th dose independent rect. 3 8
16 35.14 radiation 1.0 90 < th dose dependent sin 6 NA
18 35.22 radiation 40.0 270 < th dose dependent rect. 3 21
24 35.40 radiation 40.0 270 < th dose dependent rect. 4 19
27 35.50 radiation 1.0 90 > th dose independent sin 6 NA
34 35.59 radiation 40.0 270 < th dose dependent rect. 4 7
37 35.63 radiation 1.0 90 < th dose independent sin 7 NA
44 35.75 radiation 20.0 270 < th dose independent rect. 17 16
51 35.86 precipitation 0.1 270 < th dose independent rect. 15 8
52 35.86 precipitation 0.1 270 < th dose dependent rect. 15 8
55 35.88 humidity 50.0 270 > th dose dependent rect. 22 6
59 35.93 atmosphere 1000.0 270 > th dose independent rect. 22 6
64 35.98 temperature 20.0 270 > th dose independent rect. 23 4
65 35.98 precipitation 0.1 270 < th dose independent rect. 3 8
66 35.98 precipitation 0.1 270 < th dose dependent rect. 3 8
67 35.99 atmosphere 1000.0 270 > th dose independent rect. 23 4
75 36.04 wind 9.0 270 < th dose independent rect. 11 16
78 36.04 humidity 70.0 270 > th dose dependent rect. 23 4
79 36.04 humidity 80.0 10 > th dose dependent rect. 24 6
84 36.08 temperature 20.0 270 > th dose independent rect. 24 2
85 36.11 temperature 10.0 270 > th dose independent rect. 3 8
86 36.11 atmosphere 995.0 270 > th dose independent rect. 3 8
87 36.11 atmosphere 1015.0 270 < th dose independent rect. 3 8
88 36.11 temperature 10.0 270 > th dose independent rect. 11 16
90 36.13 precipitation 0.1 270 < th dose independent rect. 4 18
91 36.13 temperature 10.0 270 > th dose dependent rect. 23 16
93 36.13 precipitation 0.1 270 < th dose dependent rect. 4 18
94 36.14 wind 9.0 270 < th dose independent rect. 3 8
97 36.17 wind 9.0 270 < th dose independent rect. 23 16
99 36.17 radiation 1.0 90 < th dose dependent rect. 23 17
103 36.18 radiation 40.0 270 < th dose dependent rect. 17 16
116 36.28 radiation 1.0 90 < th dose independent rect. 23 17
125 36.32 precipitation 0.1 270 < th dose independent rect. 3 20
126 36.32 precipitation 0.1 270 < th dose dependent rect. 3 20
127 36.33 temperature 10.0 270 > th dose independent rect. 15 8
128 36.33 radiation 30.0 270 < th dose independent rect. 14 9
129 36.33 temperature 10.0 270 > th dose independent rect. 23 16
130 36.33 atmosphere 995.0 270 > th dose independent rect. 23 16
134 36.35 atmosphere 1000.0 10 > th dose independent rect. 24 6
135 36.36 humidity 60.0 90 > th dose independent rect. 5 8
142 36.42 radiation 1.0 90 < th dose independent rect. 23 7
143 36.43 wind 9.0 270 < th dose independent rect. 15 8
144 36.44 humidity 50.0 270 > th dose independent rect. 3 8
161 36.53 temperature 20.0 10 > th dose independent rect. 24 6
163 36.53 atmosphere 995.0 270 > th dose independent rect. 11 16
167 36.56 temperature 20.0 270 > th dose independent rect. 22 6
171 36.57 humidity 80.0 270 > th dose independent rect. 23 4
172 36.57 precipitation 0.1 270 < th dose independent rect. 23 16
174 36.57 temperature 10.0 270 > th dose dependent rect. 8 9
176 36.57 precipitation 0.1 270 < th dose dependent rect. 23 16
185 36.62 radiation 10.0 10 < th dose dependent rect. 24 6
195 36.65 atmosphere 1015.0 270 < th dose independent rect. 23 16
205 36.68 precipitation 0.1 270 < th dose independent rect. 17 16
206 36.68 precipitation 0.1 270 < th dose dependent rect. 17 16
225 36.74 humidity 50.0 270 > th dose dependent rect. 4 7
228 36.75 temperature 10.0 270 > th dose independent rect. 22 6
229 36.75 temperature 30.0 270 < th dose independent rect. 22 6
230 36.75 humidity 50.0 270 > th dose independent rect. 22 6
239 36.75 temperature 10.0 270 > th dose independent rect. 4 18
245 36.76 wind 9.0 270 < th dose independent rect. 22 6
255 36.78 atmosphere 995.0 90 > th dose dependent rect. 5 8
260 36.79 humidity 60.0 10 > th dose independent rect. 6 7
272 36.83 radiation 1.0 90 < th dose dependent rect. 23 11
280 36.86 radiation 1.0 90 < th dose independent rect. 23 11
289 36.88 radiation 40.0 270 < th dose dependent rect. 14 9
291 36.89 atmosphere 1015.0 270 < th dose independent rect. 4 18
302 36.91 wind 9.0 90 < th dose independent rect. 13 16
312 36.93 precipitation 0.1 90 < th dose independent rect. 5 8
315 36.93 precipitation 0.1 90 < th dose dependent rect. 5 8
324 36.96 temperature 10.0 90 > th dose independent rect. 5 8
325 36.96 atmosphere 995.0 90 > th dose independent rect. 5 8
326 36.96 atmosphere 1015.0 90 < th dose independent rect. 5 8
327 36.96 temperature 10.0 90 > th dose independent rect. 13 16
332 36.97 atmosphere 1015.0 270 < th dose dependent rect. 16 7
333 36.98 precipitation 0.1 270 < th dose independent rect. 22 6
338 36.98 precipitation 0.1 270 < th dose dependent rect. 22 6
341 36.99 humidity 90.0 30 > th dose independent rect. 24 6
343 36.99 wind 9.0 270 < th dose independent rect. 4 18
344 36.99 radiation 1.0 90 > th dose independent rect. 18 19
351 37.01 temperature 10.0 270 > th dose independent rect. 23 4
352 37.01 temperature 30.0 270 < th dose independent rect. 23 4
353 37.01 humidity 50.0 270 > th dose independent rect. 23 4
357 37.01 radiation 1.0 270 < th dose independent rect. 23 4
362 37.01 precipitation 0.1 270 < th dose independent rect. 23 4
365 37.01 temperature 10.0 270 > th dose independent rect. 3 20
367 37.01 radiation 1.0 270 < th dose dependent rect. 23 4
372 37.01 precipitation 0.1 270 < th dose dependent rect. 23 4
374 37.02 wind 9.0 270 < th dose independent rect. 23 4
375 37.02 wind 9.0 90 < th dose independent rect. 5 8
377 37.02 radiation 1.0 90 > th dose independent rect. 4 9
398 37.04 humidity 50.0 270 > th dose independent rect. 23 16
399 37.04 temperature 30.0 270 < th dose dependent rect. 4 7
412 37.07 atmosphere 995.0 270 > th dose dependent rect. 4 6
413 37.07 humidity 50.0 30 > th dose dependent rect. 6 7
418 37.08 wind 9.0 10 < th dose dependent rect. 6 18
421 37.09 wind 1.0 270 > th dose independent rect. 15 8
435 37.13 radiation 40.0 10 < th dose independent rect. 6 6
442 37.14 humidity 90.0 270 < th dose independent rect. 9 8
466 37.17 atmosphere 1015.0 10 < th dose independent rect. 6 18
481 37.19 wind 9.0 10 < th dose independent rect. 24 6
482 37.19 temperature 10.0 10 > th dose independent rect. 24 6
483 37.19 temperature 30.0 10 < th dose independent rect. 24 6
484 37.19 humidity 50.0 10 > th dose independent rect. 24 6
488 37.19 radiation 20.0 10 < th dose independent rect. 24 6
491 37.19 wind 1.0 270 > th dose independent rect. 9 8
492 37.19 wind 9.0 270 < th dose independent rect. 9 8
494 37.19 temperature 10.0 10 > th dose independent rect. 6 18
517 37.23 atmosphere 1015.0 270 < th dose independent rect. 15 8
527 37.24 temperature 30.0 30 < th dose dependent rect. 6 7
536 37.26 precipitation 0.1 10 < th dose independent rect. 6 18
538 37.26 wind 9.0 270 < th dose independent rect. 3 20
541 37.26 precipitation 0.1 10 < th dose dependent rect. 6 18
542 37.27 atmosphere 1015.0 10 < th dose independent rect. 24 6
545 37.27 wind 7.0 270 < th dose independent rect. 17 16
571 37.32 temperature 15.0 270 > th dose independent rect. 9 8
578 37.33 wind 9.0 90 < th dose dependent rect. 5 8
591 37.35 atmosphere 995.0 10 > th dose dependent rect. 6 7
598 37.36 atmosphere 1015.0 270 < th dose independent rect. 9 8
599 37.36 temperature 10.0 270 > th dose independent rect. 17 16
603 37.37 atmosphere 1015.0 270 < th dose independent rect. 23 4
606 37.37 wind 9.0 10 < th dose independent rect. 6 18
642 37.40 precipitation 0.1 270 < th dose independent rect. 11 16
644 37.40 precipitation 0.1 270 < th dose dependent rect. 11 16
651 37.42 precipitation 0.1 270 < th dose independent rect. 9 8
654 37.42 precipitation 0.1 270 < th dose dependent rect. 9 8
680 37.47 atmosphere 1015.0 270 < th dose independent rect. 3 20
696 37.49 temperature 10.0 270 > th dose dependent rect. 23 4
725 37.51 wind 5.0 10 < th dose independent rect. 6 18
735 37.52 atmosphere 1015.0 270 < th dose independent rect. 22 6
748 37.53 atmosphere 995.0 90 > th dose independent rect. 13 16
754 37.54 humidity 50.0 270 > th dose independent rect. 17 16
755 37.54 wind 9.0 30 < th dose independent rect. 24 17
769 37.56 atmosphere 995.0 270 > th dose independent rect. 9 8
822 37.61 temperature 10.0 270 > th dose dependent rect. 22 6
854 37.64 wind 9.0 30 < th dose independent rect. 17 7
866 37.64 radiation 40.0 30 < th dose dependent rect. 17 7
869 37.64 radiation 10.0 10 < th dose dependent rect. 24 17
871 37.65 wind 1.0 270 > th dose independent rect. 17 15
894 37.66 wind 9.0 10 < th dose dependent rect. 6 7
900 37.67 temperature 10.0 1440 > th dose independent rect. 1 6
903 37.67 temperature 30.0 1440 < th dose independent rect. 1 6
907 37.67 humidity 50.0 1440 > th dose independent rect. 1 6
912 37.67 atmosphere 995.0 1440 > th dose independent rect. 1 6
913 37.67 radiation 40.0 1440 < th dose independent rect. 1 6
920 37.67 temperature 10.0 1440 > th dose independent rect. 7 18
952 37.68 humidity 80.0 10 > th dose dependent rect. 22 8
959 37.69 temperature 10.0 30 > th dose independent rect. 17 7
960 37.69 radiation 20.0 30 < th dose independent rect. 17 7
967 37.69 temperature 10.0 30 > th dose independent rect. 24 17
968 37.69 temperature 30.0 30 < th dose independent rect. 6 18
989 37.71 humidity 50.0 10 > th dose independent rect. 17 7
991 37.71 atmosphere 1015.0 30 < th dose independent rect. 24 17