Os05g0283600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0283600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392.16 | 0.93 | 4.06 | -0.848 | 0.152 | -1.24 | 0.236 | 1.29 | 0.792 | 10.7 | 25.6 | 2609 | -- | -- |
| 394.42 | 0.925 | 4.08 | -1.1 | 0.204 | -1.26 | 0.101 | -- | 0.702 | 11.3 | 25.6 | 2613 | -- | -- |
| 392.27 | 0.922 | 4.06 | -0.857 | 0.146 | -1.23 | -- | 1.22 | 0.788 | 11.9 | 25.6 | 2589 | -- | -- |
| 393.29 | 0.924 | 4.11 | -1.23 | 0.127 | -1.12 | -- | -- | 0.675 | 12.7 | 25.7 | 2460 | -- | -- |
| 393.47 | 0.924 | 4.06 | -0.855 | -- | -1.27 | -- | 1.19 | 0.805 | -- | 25.6 | 2520 | -- | -- |
| 433.07 | 0.976 | 4.18 | -1.64 | 0.36 | -- | 0.08 | -- | 0.347 | 12.5 | -- | -- | -- | -- |
| 433.1 | 0.975 | 4.18 | -1.63 | 0.36 | -- | -- | -- | 0.348 | 12.5 | -- | -- | -- | -- |
| 394.34 | 0.925 | 4.11 | -1.23 | -- | -1.17 | -- | -- | 0.696 | -- | 25.62 | 2458 | -- | -- |
| 431.16 | 0.967 | 4.09 | -- | 0.139 | -1.42 | -- | -- | 0.694 | 13.7 | 25.2 | 5247 | -- | -- |
| 441.24 | 0.982 | 4.19 | -1.65 | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
| 503.45 | 1.05 | 4.14 | -- | 0.385 | -- | -- | -- | 0.53 | 12.7 | -- | -- | -- | -- |
| 394.93 | 0.926 | 4.03 | -- | -- | -1.72 | -- | -- | 1.02 | -- | 21.1 | 19668 | -- | -- |
| 512.74 | 1.06 | 4.15 | -- | -- | -- | -- | -- | 0.524 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 379.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 2 | 379.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 3 | 380.70 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 4 | 380.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 5 | 380.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 6 | 381.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 7 | 381.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 8 | 381.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 9 | 381.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 10 | 382.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 11 | 382.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 12 | 382.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 17 | 382.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 18 | 383.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 19 | 383.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 20 | 383.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 21 | 383.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 26 | 383.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 38 | 384.29 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 42 | 384.44 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 45 | 384.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 59 | 384.93 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 71 | 385.32 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 76 | 385.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 78 | 385.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 79 | 385.41 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 89 | 385.51 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 110 | 385.85 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 116 | 385.87 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 142 | 386.07 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 169 | 386.26 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 170 | 386.26 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 172 | 386.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 184 | 386.39 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 261 | 386.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 262 | 386.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 263 | 386.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 11 |
| 281 | 387.09 | temperature | 20.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 295 | 387.13 | temperature | 20.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 302 | 387.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 324 | 387.25 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 11 |
| 435 | 387.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 453 | 387.67 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 11 |
| 459 | 387.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 460 | 387.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 477 | 387.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 489 | 387.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 540 | 387.88 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 571 | 387.96 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 5 | NA |
| 581 | 387.96 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 5 | NA |
| 584 | 387.98 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 5 | NA |
| 611 | 388.03 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 5 | NA |
| 617 | 388.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 649 | 388.13 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 694 | 388.24 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 699 | 388.25 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 725 | 388.33 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 744 | 388.37 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 947 | 388.80 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |