Os05g0283200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os05g0283200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366.23 | 0.899 | 3.16 | -1.17 | 0.306 | 0.81 | 0.207 | -6.37 | -0.514 | 7.89 | 24.3 | 852 | -- | -- |
| 378.61 | 0.906 | 3.02 | 0.0247 | 0.15 | 0.317 | 1.16 | -- | -0.213 | 8.5 | 1.898 | 1985 | -- | -- |
| 366.31 | 0.891 | 3.16 | -1.21 | 0.315 | 0.841 | -- | -6.72 | -0.521 | 7.69 | 24.46 | 850 | -- | -- |
| 373.99 | 0.901 | 3.08 | -0.668 | 0.134 | 0.804 | -- | -- | -0.476 | 8 | 16.39 | 27849 | -- | -- |
| 370.38 | 0.896 | 3.16 | -1.08 | -- | 0.606 | -- | -6.03 | -0.485 | -- | 24.28 | 889 | -- | -- |
| 379.95 | 0.914 | 3 | 0.123 | 0.101 | -- | 1.07 | -- | -0.152 | 9.37 | -- | -- | -- | -- |
| 383.41 | 0.917 | 3 | 0.157 | 0.153 | -- | -- | -- | -0.154 | 6.32 | -- | -- | -- | -- |
| 374.74 | 0.902 | 3.08 | -0.495 | -- | 0.698 | -- | -- | -0.46 | -- | 19.21 | 27444 | -- | -- |
| 375.96 | 0.903 | 3.04 | -- | 0.15 | 0.416 | -- | -- | -0.327 | 6.61 | 22.5 | 27751 | -- | -- |
| 384.63 | 0.916 | 3.01 | 0.161 | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
| 384.06 | 0.917 | 3.01 | -- | 0.155 | -- | -- | -- | -0.172 | 6.26 | -- | -- | -- | -- |
| 377.07 | 0.904 | 3.04 | -- | -- | 0.418 | -- | -- | -0.32 | -- | 22.49 | 27410 | -- | -- |
| 385.31 | 0.916 | 3.01 | -- | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.61 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 11 |
| 2 | 355.91 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 9 |
| 3 | 356.09 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 11 | 356.09 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 21 | 356.66 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 5 |
| 24 | 356.90 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 9 | 8 |
| 32 | 357.12 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 1 |
| 59 | 358.01 | humidity | 90 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 61 | 358.04 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 9 | 6 |
| 79 | 358.49 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 86 | 358.74 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 8 | 5 |
| 89 | 358.83 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 99 | 359.29 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 108 | 359.51 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 109 | 359.54 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 11 |
| 128 | 359.60 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 7 |
| 136 | 359.63 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 138 | 359.63 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 147 | 359.70 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 157 | 359.79 | radiation | 40 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 199 | 359.87 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 2 |
| 210 | 360.04 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 211 | 360.05 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 11 | 4 |
| 215 | 360.11 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 6 |
| 218 | 360.16 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 8 | 11 |
| 253 | 360.33 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 8 | 9 |
| 278 | 360.48 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 311 | 360.62 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 320 | 360.78 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 351 | 361.12 | radiation | 40 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 352 | 361.13 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 6 |
| 353 | 361.13 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 361 | 361.21 | radiation | 40 | 10 | > th | dose independent | rect. | 13 | 2 |
| 389 | 361.35 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 390 | 361.36 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 411 | 361.49 | wind | 1 | 90 | < th | dose independent | rect. | 6 | 1 |
| 434 | 361.59 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 442 | 361.64 | atmosphere | 1000 | 10 | < th | dose independent | sin | 22 | NA |
| 445 | 361.67 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 8 | 18 |
| 447 | 361.68 | radiation | 20 | 10 | < th | dose independent | rect. | 7 | 1 |
| 448 | 361.68 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 12 | 2 |
| 459 | 361.76 | wind | 9 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 479 | 361.87 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 485 | 361.91 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 488 | 361.92 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 514 | 362.01 | wind | 9 | 30 | > th | dose dependent | sin | 15 | NA |
| 609 | 362.25 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 11 | 4 |
| 616 | 362.29 | wind | 7 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 620 | 362.31 | atmosphere | 1000 | 10 | > th | dose independent | sin | 22 | NA |
| 800 | 362.97 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 842 | 363.03 | radiation | 40 | 10 | > th | dose dependent | sin | 13 | NA |
| 891 | 363.23 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 934 | 363.39 | temperature | 30 | 30 | < th | dose independent | rect. | 8 | 5 |
| 966 | 363.52 | radiation | 40 | 10 | < th | dose independent | sin | 13 | NA |
| 971 | 363.54 | radiation | 40 | 10 | > th | dose independent | sin | 13 | NA |
| 999 | 363.63 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 8 | 15 |
| 1000 | 363.63 | radiation | 40 | 270 | > th | dose dependent | rect. | 8 | 3 |