Os05g0280500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospholipid/glycerol acyltransferase domain containing protein.
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Os05g0280500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phospholipid/glycerol acyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 289.75 | 0.8 | 3.02 | -0.0749 | 0.00828 | 0.85 | 1.25 | -3.72 | 0.0113 | 22.5 | 91.63 | 2 | -- | -- |
| 308.78 | 0.825 | 3 | -0.17 | 0.0117 | 0.666 | -1.62 | -- | -0.0362 | 5.99 | 91.63 | 2 | -- | -- |
| 294.64 | 0.799 | 3.02 | -0.171 | 0.0357 | 0.927 | -- | -3.54 | -0.00902 | 0.28 | 92.67 | 2 | -- | -- |
| 312.67 | 0.824 | 3 | -0.173 | 0.0949 | 0.972 | -- | -- | -0.0574 | 0.648 | 94.14 | 2 | -- | -- |
| 294.72 | 0.8 | 3.02 | -0.143 | -- | 0.914 | -- | -3.54 | -0.00333 | -- | 92.59 | 2 | -- | -- |
| 318.94 | 0.837 | 3.02 | -0.119 | 0.282 | -- | -1.08 | -- | -0.139 | 4.92 | -- | -- | -- | -- |
| 321.16 | 0.839 | 3.02 | -0.118 | 0.291 | -- | -- | -- | -0.134 | 3.41 | -- | -- | -- | -- |
| 313.18 | 0.824 | 3 | -0.171 | -- | 0.99 | -- | -- | -0.0531 | -- | 94.07 | 2 | -- | -- |
| 313.4 | 0.825 | 3 | -- | 0.101 | 0.942 | -- | -- | -0.0446 | 1.56 | 94.19 | 2 | -- | -- |
| 325.91 | 0.844 | 3.02 | -0.106 | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
| 321.53 | 0.839 | 3.02 | -- | 0.288 | -- | -- | -- | -0.121 | 3.42 | -- | -- | -- | -- |
| 313.94 | 0.825 | 3 | -- | -- | 0.984 | -- | -- | -0.0361 | -- | 94.11 | 2 | -- | -- |
| 326.21 | 0.843 | 3.02 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 277.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 277.46 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 9 | 278.36 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 3 |
| 10 | 278.36 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 11 | 278.72 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 7 |
| 14 | 279.08 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 7 |
| 26 | 280.01 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 30 | 281.01 | humidity | 90.0 | 720 | > th | dose independent | rect. | 19 | 3 |
| 37 | 281.69 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 56 | 282.55 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 63 | 282.76 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 97 | 283.57 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 125 | 284.42 | humidity | 90.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 129 | 284.53 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 170 | 285.56 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 173 | 285.80 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 187 | 286.71 | humidity | 90.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 197 | 287.16 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 200 | 287.37 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 217 | 287.90 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 7 |
| 241 | 288.90 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 253 | 288.98 | humidity | 90.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 324 | 290.43 | humidity | 90.0 | 270 | > th | dose independent | rect. | 19 | 11 |
| 342 | 290.86 | atmosphere | 1005.0 | 10 | < th | dose independent | sin | 8 | NA |
| 407 | 291.41 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 437 | 291.63 | atmosphere | 1005.0 | 10 | > th | dose independent | sin | 8 | NA |
| 490 | 292.04 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 19 | 14 |
| 502 | 292.15 | humidity | 90.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 560 | 292.47 | humidity | 90.0 | 270 | > th | dose independent | sin | 12 | NA |
| 576 | 292.58 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 627 | 292.80 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 642 | 292.90 | humidity | 90.0 | 270 | < th | dose independent | rect. | 19 | 12 |
| 697 | 293.18 | humidity | 90.0 | 10 | > th | dose dependent | no | NA | NA |
| 711 | 293.22 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 735 | 293.34 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 765 | 293.43 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 14 |
| 770 | 293.45 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 910 | 294.16 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 15 |
| 944 | 294.28 | atmosphere | 1010.0 | 10 | < th | dose dependent | sin | 8 | NA |