Os05g0278500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os05g0278500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 960.95 | 1.46 | 6.73 | 5.89 | 0.95 | -1.1 | -0.373 | -15.3 | 1.86 | 6.79 | 29.82 | 1223 | -- | -- |
| 1046.38 | 1.51 | 6.43 | 8.43 | 0.999 | -2.53 | -0.355 | -- | 1.93 | 7.42 | 31.67 | 5517 | -- | -- |
| 960.29 | 1.44 | 6.76 | 5.53 | 0.951 | -0.792 | -- | -17.9 | 1.89 | 6.86 | 30.82 | 1215 | -- | -- |
| 975.33 | 1.45 | 6.4 | 8.78 | 0.815 | -2.64 | -- | -- | 2.01 | 6 | 29.09 | 1196 | -- | -- |
| 1003.14 | 1.48 | 6.77 | 5.7 | -- | -0.953 | -- | -17.7 | 1.9 | -- | 29.88 | 1094 | -- | -- |
| 1353.31 | 1.72 | 6.3 | 7.75 | 0.954 | -- | 0.315 | -- | 2.42 | 8.71 | -- | -- | -- | -- |
| 1353.59 | 1.72 | 6.3 | 7.76 | 0.956 | -- | -- | -- | 2.42 | 8.6 | -- | -- | -- | -- |
| 982.35 | 1.46 | 6.32 | 8.68 | -- | -3.53 | -- | -- | 2.48 | -- | 26.6 | 1018 | -- | -- |
| 2790.12 | 2.46 | 6.58 | -- | 0.954 | -1.79 | -- | -- | 1.22 | 6.97 | 33.4 | 1063 | -- | -- |
| 1405.06 | 1.75 | 6.33 | 7.76 | -- | -- | -- | -- | 2.43 | -- | -- | -- | -- | -- |
| 2940.48 | 2.54 | 6.5 | -- | 0.994 | -- | -- | -- | 1.56 | 8.02 | -- | -- | -- | -- |
| 2836.15 | 2.48 | 6.59 | -- | -- | -1.91 | -- | -- | 1.25 | -- | 33.5 | 966 | -- | -- |
| 2994.52 | 2.55 | 6.52 | -- | -- | -- | -- | -- | 1.57 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 957.35 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 4 | 960.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 5 | 960.98 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 9 | 962.77 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 22 | 965.61 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 37 | 965.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 44 | 966.06 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 74 | 967.39 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 76 | 967.45 | temperature | 30 | 1440 | > th | dose dependent | sin | 15 | NA |
| 92 | 968.86 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 114 | 969.43 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 120 | 969.92 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 123 | 970.03 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 126 | 970.15 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 147 | 971.00 | humidity | 90 | 1440 | < th | dose dependent | sin | 18 | NA |
| 156 | 971.73 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 303 | 976.90 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 311 | 977.23 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 475 | 980.36 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 645 | 987.66 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 21 |
| 690 | 989.57 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 954 | 995.75 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |