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Os05g0275700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0162) R2 : 0.397
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.664 (0.0406) R2dC : 0.353 R2C : 0.348
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.184 (0.0341) R2dN8 : 0.0496 R2N8 : 0.0443
σ : 0.306
deviance : 42.79
__
_____
C
peak time of C : 15.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.92 0.225 10.3 1.07 0.675 -0.507 0.12 0.836 0.0792 15.3 20.9 1832 -- --
24.55 0.231 10.3 1.04 0.689 -0.644 0.0425 -- 0.055 15.2 19.01 6094 -- --
22.96 0.223 10.3 1.07 0.675 -0.506 -- 0.841 0.0804 15.3 20.93 1832 -- --
24.28 0.23 10.3 1.1 0.659 -0.757 -- -- 0.0582 15.2 19 6168 -- --
47.17 0.32 10.3 1.16 -- -0.513 -- 1.03 0.091 -- 21.3 2485 -- --
32.88 0.269 10.4 0.61 0.675 -- 0.0999 -- -0.116 15.2 -- -- -- --
32.92 0.269 10.4 0.612 0.676 -- -- -- -0.116 15.2 -- -- -- --
48.07 0.323 10.3 1.03 -- -0.822 -- -- 0.0484 -- 18.9 3904 -- --
40.25 0.295 10.4 -- 0.677 -0.233 -- -- -0.127 15.1 22.36 1500 -- --
58.85 0.358 10.4 0.583 -- -- -- -- -0.134 -- -- -- -- --
42.79 0.306 10.4 -- 0.664 -- -- -- -0.184 15.2 -- -- -- --
57.46 0.353 10.4 -- -- 0.408 -- -- -0.239 -- 28.12 218 -- --
67.83 0.384 10.4 -- -- -- -- -- -0.198 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.14 temperature 20 14400 < th dose independent rect. 20 1
3 22.32 wind 1 43200 > th dose dependent rect. 1 1
7 22.37 temperature 20 14400 > th dose independent rect. 20 1
19 22.57 wind 9 43200 < th dose dependent rect. 1 1
35 22.73 humidity 80 14400 > th dose dependent rect. 5 1
47 22.81 temperature 25 14400 < th dose dependent rect. 9 1
67 22.95 temperature 20 14400 > th dose independent rect. 7 1
73 22.97 temperature 20 14400 < th dose independent rect. 7 1
74 22.97 wind 1 43200 > th dose dependent rect. 22 5
82 23.01 temperature 25 14400 < th dose independent rect. 11 1
87 23.03 wind 9 43200 > th dose independent rect. 21 19
89 23.04 temperature 20 4320 > th dose dependent rect. 10 1
90 23.04 wind 9 43200 < th dose dependent rect. 22 5
96 23.07 wind 9 43200 > th dose independent rect. 2 14
103 23.08 wind 9 43200 > th dose independent rect. 10 3
108 23.09 temperature 25 14400 > th dose independent rect. 11 1
114 23.10 temperature 25 14400 < th dose independent rect. 13 3
115 23.10 temperature 25 14400 < th dose independent rect. 11 5
120 23.10 wind 9 43200 < th dose independent rect. 21 19
121 23.10 temperature 30 1440 < th dose dependent rect. 24 1
123 23.11 wind 9 43200 < th dose independent rect. 10 2
131 23.12 wind 9 43200 > th dose independent rect. 9 5
136 23.12 temperature 30 1440 < th dose dependent rect. 24 4
138 23.13 temperature 25 14400 < th dose independent rect. 15 1
144 23.13 temperature 10 1440 > th dose dependent rect. 24 4
147 23.14 wind 9 43200 > th dose independent sin 3 NA
155 23.14 temperature 20 1440 < th dose independent rect. 22 15
159 23.14 wind 9 43200 < th dose dependent rect. 22 8
161 23.15 temperature 20 14400 > th dose independent sin 15 NA
167 23.15 temperature 20 1440 < th dose independent rect. 22 13
168 23.15 wind 9 43200 < th dose independent rect. 2 14
190 23.17 wind 9 43200 < th dose independent sin 3 NA
191 23.17 temperature 25 14400 > th dose independent rect. 11 5
200 23.17 temperature 20 1440 > th dose independent rect. 22 15
204 23.17 temperature 10 1440 > th dose dependent rect. 24 1
209 23.18 temperature 25 14400 > th dose independent rect. 13 3
211 23.18 wind 9 43200 < th dose independent rect. 8 6
229 23.19 wind 9 43200 < th dose independent rect. 4 10
231 23.19 temperature 20 1440 > th dose independent rect. 22 13
235 23.19 temperature 30 14400 < th dose dependent rect. 13 1
240 23.19 wind 1 43200 > th dose dependent rect. 21 9
257 23.21 temperature 20 14400 < th dose independent sin 15 NA
275 23.22 temperature 20 1440 < th dose independent sin 7 NA
285 23.22 temperature 10 1440 > th dose dependent rect. 3 1
308 23.23 humidity 90 14400 > th dose dependent rect. 2 15
310 23.24 temperature 20 1440 > th dose independent sin 7 NA
327 23.24 temperature 30 14400 < th dose dependent rect. 11 3
334 23.25 wind 9 43200 < th dose independent rect. 9 4
394 23.27 atmosphere 995 43200 < th dose dependent rect. 22 13
422 23.29 wind 3 43200 > th dose independent rect. 1 1
430 23.29 atmosphere 995 43200 < th dose independent rect. 23 15
432 23.29 atmosphere 995 43200 < th dose dependent sin 8 NA
445 23.30 atmosphere 995 43200 < th dose independent rect. 1 12
459 23.30 wind 9 43200 > th dose dependent rect. 10 7
473 23.31 temperature 20 14400 > th dose independent rect. 17 17
483 23.31 wind 7 43200 > th dose dependent rect. 10 3
501 23.32 atmosphere 995 43200 > th dose independent rect. 2 10
502 23.32 atmosphere 995 43200 < th dose independent rect. 2 10
522 23.33 atmosphere 995 43200 > th dose independent rect. 3 8
545 23.34 temperature 20 1440 < th dose independent rect. 5 2
549 23.34 atmosphere 995 43200 < th dose independent rect. 3 8
575 23.35 temperature 20 1440 > th dose independent rect. 5 3
601 23.35 temperature 25 270 < th dose dependent rect. 15 19
604 23.36 temperature 20 1440 > th dose independent rect. 6 1
605 23.36 atmosphere 995 43200 > th dose independent rect. 4 6
610 23.36 temperature 20 14400 < th dose independent rect. 17 17
614 23.36 temperature 20 14400 > th dose independent rect. 7 20
631 23.36 wind 7 43200 > th dose dependent rect. 21 17
647 23.37 temperature 20 1440 < th dose independent rect. 18 14
650 23.37 temperature 20 1440 > th dose independent rect. 17 15
668 23.37 atmosphere 995 43200 < th dose dependent rect. 1 9
673 23.38 atmosphere 995 43200 > th dose independent rect. 5 4
716 23.39 atmosphere 995 43200 < th dose independent rect. 4 6
723 23.39 atmosphere 995 43200 > th dose independent rect. 1 13
750 23.40 wind 3 43200 < th dose independent rect. 1 1
764 23.40 wind 1 43200 > th dose dependent rect. 5 1
851 23.42 wind 9 43200 < th dose dependent rect. 5 1
854 23.42 temperature 20 4320 > th dose dependent rect. 9 5
863 23.42 wind 7 43200 > th dose dependent rect. 3 11
904 23.43 humidity 90 14400 > th dose dependent rect. 7 22
938 23.44 humidity 90 14400 > th dose dependent sin 3 NA
942 23.44 wind 7 43200 > th dose dependent rect. 8 6
980 23.45 temperature 20 14400 < th dose independent rect. 7 20
993 23.45 humidity 80 14400 > th dose dependent rect. 10 5
996 23.45 atmosphere 995 43200 < th dose dependent rect. 3 6