Os05g0273800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Soluble epoxide hydrolase.
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Os05g0273800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Soluble epoxide hydrolase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.43 | 0.434 | 12.1 | -0.0511 | 1.43 | -3.9 | -1.25 | 2.99 | -0.0362 | 7.48 | 0.45 | 738 | -- | -- |
| 88.84 | 0.439 | 12.1 | -0.065 | 2.04 | -4.71 | 1.02 | -- | -0.0411 | 6.75 | 0.37 | 730 | -- | -- |
| 86.76 | 0.434 | 12.1 | -0.0497 | 1.53 | -4.05 | -- | 1.65 | -0.0259 | 7.36 | 0.4253 | 740 | -- | -- |
| 90.96 | 0.444 | 12.1 | 0.0212 | 1.61 | -4.12 | -- | -- | -0.0183 | 7.25 | 0.42 | 739 | -- | -- |
| 97.83 | 0.461 | 12.1 | 0.136 | -- | -2.09 | -- | 2.02 | 0.0734 | -- | 0.38 | 584 | -- | -- |
| 124.01 | 0.522 | 12.1 | 0.376 | 1.84 | -- | -1.32 | -- | 0.157 | 16.5 | -- | -- | -- | -- |
| 128.64 | 0.531 | 12.1 | 0.366 | 1.84 | -- | -- | -- | 0.15 | 16.6 | -- | -- | -- | -- |
| 106.25 | 0.48 | 12.1 | 0.203 | -- | -2.07 | -- | -- | 0.0388 | -- | 0.4225 | 598 | -- | -- |
| 90.94 | 0.444 | 12.1 | -- | 1.62 | -4.14 | -- | -- | -0.00485 | 7.23 | 0.43 | 739 | -- | -- |
| 308.2 | 0.82 | 12.1 | 0.295 | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
| 132.16 | 0.538 | 12.1 | -- | 1.83 | -- | -- | -- | 0.109 | 16.6 | -- | -- | -- | -- |
| 107.22 | 0.482 | 12.1 | -- | -- | -2.1 | -- | -- | 0.0433 | -- | 0.43 | 598 | -- | -- |
| 310.5 | 0.822 | 12.1 | -- | -- | -- | -- | -- | 0.0686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.37 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 3 | 82.01 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 20 |
| 6 | 83.25 | radiation | 1 | 720 | < th | dose dependent | sin | 0 | NA |
| 7 | 83.38 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 9 | 83.57 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 19 |
| 24 | 85.58 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 29 | 86.14 | radiation | 1 | 720 | < th | dose independent | rect. | 5 | 22 |
| 30 | 86.18 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 14 |
| 35 | 86.46 | radiation | 1 | 720 | < th | dose dependent | sin | 16 | NA |
| 39 | 86.66 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 40 | 86.68 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 22 |
| 46 | 86.85 | radiation | 1 | 720 | < th | dose dependent | no | NA | NA |
| 48 | 86.94 | radiation | 1 | 720 | < th | dose independent | sin | 22 | NA |
| 52 | 87.03 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 58 | 87.19 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |
| 72 | 87.45 | radiation | 1 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 73 | 87.47 | radiation | 1 | 720 | < th | dose independent | sin | 16 | NA |
| 78 | 87.52 | radiation | 1 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 96 | 87.89 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 116 | 88.30 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 15 |
| 134 | 88.70 | radiation | 1 | 720 | > th | dose independent | sin | 15 | NA |
| 137 | 88.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 142 | 88.80 | radiation | 1 | 720 | > th | dose independent | rect. | 6 | 13 |
| 161 | 88.97 | radiation | 1 | 720 | < th | dose dependent | rect. | 13 | 17 |
| 170 | 89.09 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 6 |
| 173 | 89.11 | radiation | 1 | 720 | < th | dose independent | rect. | 22 | 23 |
| 174 | 89.13 | humidity | 60 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 194 | 89.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 9 |
| 203 | 89.32 | radiation | 1 | 720 | < th | dose independent | no | NA | NA |
| 204 | 89.36 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 23 |
| 216 | 89.50 | radiation | 1 | 720 | > th | dose independent | no | NA | NA |
| 267 | 89.58 | humidity | 70 | 720 | > th | dose independent | sin | 15 | NA |
| 288 | 89.70 | radiation | 1 | 720 | > th | dose independent | rect. | 16 | 23 |
| 305 | 89.80 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 312 | 89.84 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 314 | 89.85 | radiation | 1 | 720 | < th | dose independent | rect. | 20 | 23 |
| 315 | 89.85 | humidity | 90 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 340 | 89.95 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 18 |
| 342 | 89.98 | humidity | 90 | 720 | < th | dose dependent | rect. | 11 | 10 |
| 371 | 90.21 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 390 | 90.27 | radiation | 1 | 720 | > th | dose independent | rect. | 10 | 23 |
| 397 | 90.29 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 416 | 90.36 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 422 | 90.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 435 | 90.41 | wind | 7 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 447 | 90.43 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 474 | 90.50 | humidity | 90 | 720 | < th | dose dependent | sin | 19 | NA |
| 481 | 90.54 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 17 |
| 493 | 90.60 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 494 | 90.62 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 513 | 90.68 | radiation | 1 | 720 | < th | dose independent | rect. | 24 | 23 |
| 539 | 90.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 543 | 90.77 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 558 | 90.81 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 605 | 90.97 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 23 |
| 627 | 91.04 | radiation | 1 | 720 | < th | dose independent | rect. | 13 | 8 |
| 633 | 91.07 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 656 | 91.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 665 | 91.22 | wind | 7 | 43200 | < th | dose independent | sin | 19 | NA |
| 670 | 91.23 | humidity | 70 | 720 | < th | dose independent | sin | 15 | NA |
| 672 | 91.23 | wind | 5 | 43200 | > th | dose dependent | sin | 19 | NA |
| 679 | 91.27 | humidity | 70 | 720 | < th | dose independent | rect. | 14 | 6 |
| 696 | 91.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 701 | 91.31 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 708 | 91.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 710 | 91.33 | wind | 7 | 43200 | > th | dose independent | sin | 20 | NA |
| 715 | 91.34 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 716 | 91.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 729 | 91.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 737 | 91.40 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 17 |
| 805 | 91.51 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 811 | 91.53 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 835 | 91.55 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 13 |
| 895 | 91.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 897 | 91.66 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 919 | 91.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 937 | 91.72 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 951 | 91.75 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 956 | 91.76 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |