Os05g0270400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase inhibitor family protein.
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Os05g0270400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase inhibitor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.48 | 0.228 | 12 | -0.672 | 0.052 | 0.376 | 0.313 | -0.754 | -0.174 | 16.3 | 22.3 | 734 | -- | -- |
| 25.31 | 0.234 | 12 | -0.443 | 0.0594 | 0.383 | 0.282 | -- | -0.118 | 15.6 | 22.2 | 758 | -- | -- |
| 23.72 | 0.227 | 12 | -0.67 | 0.0554 | 0.371 | -- | -0.772 | -0.17 | 17.6 | 22.3 | 757 | -- | -- |
| 25.48 | 0.235 | 12 | -0.421 | 0.0677 | 0.372 | -- | -- | -0.111 | 17.9 | 22.3 | 758 | -- | -- |
| 23.91 | 0.228 | 12 | -0.665 | -- | 0.378 | -- | -0.733 | -0.173 | -- | 22.24 | 734 | -- | -- |
| 31.29 | 0.262 | 12 | -0.315 | 0.113 | -- | -0.346 | -- | 0.0121 | 21.2 | -- | -- | -- | -- |
| 31.64 | 0.263 | 12 | -0.301 | 0.124 | -- | -- | -- | 0.0135 | 20 | -- | -- | -- | -- |
| 25.7 | 0.236 | 12 | -0.425 | -- | 0.378 | -- | -- | -0.115 | -- | 22.21 | 734 | -- | -- |
| 29.83 | 0.254 | 12 | -- | 0.0766 | 0.293 | -- | -- | -0.0432 | 18.2 | 22.3 | 734 | -- | -- |
| 32.47 | 0.266 | 12 | -0.303 | -- | -- | -- | -- | 0.0119 | -- | -- | -- | -- | -- |
| 34.03 | 0.273 | 12 | -- | 0.126 | -- | -- | -- | 0.047 | 19.8 | -- | -- | -- | -- |
| 30.17 | 0.256 | 12 | -- | -- | 0.301 | -- | -- | -0.0469 | -- | 22.31 | 704 | -- | -- |
| 34.89 | 0.276 | 12 | -- | -- | -- | -- | -- | 0.0455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.01 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 5 | 23.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 14 | 23.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 16 | 23.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 17 | 23.18 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 32 | 23.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 42 | 23.27 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 45 | 23.28 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 79 | 23.38 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 89 | 23.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 93 | 23.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 123 | 23.49 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 125 | 23.50 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 130 | 23.52 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 157 | 23.59 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 232 | 23.73 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 279 | 23.80 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 329 | 23.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 371 | 23.90 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 381 | 23.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 408 | 23.94 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 419 | 23.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 427 | 23.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 429 | 23.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 444 | 23.99 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 446 | 24.00 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 448 | 24.00 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 461 | 24.01 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 481 | 24.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 494 | 24.03 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 511 | 24.04 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 11 | NA |
| 534 | 24.05 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 540 | 24.05 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 554 | 24.06 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 572 | 24.06 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 21 |
| 600 | 24.07 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 626 | 24.08 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 11 | NA |
| 665 | 24.09 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 679 | 24.09 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 688 | 24.09 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 698 | 24.09 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 716 | 24.10 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 4 | NA |
| 718 | 24.10 | atmosphere | 1005 | 43200 | > th | dose independent | no | NA | NA |
| 761 | 24.10 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 794 | 24.11 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 823 | 24.11 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 879 | 24.12 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 896 | 24.13 | atmosphere | 1005 | 43200 | < th | dose independent | no | NA | NA |
| 918 | 24.13 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 923 | 24.13 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 968 | 24.14 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 16 | 20 |
| 981 | 24.14 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 998 | 24.15 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |