Os05g0268500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine carboxypeptidase II chains A and B (EC 3.4.16.6) (Carboxypeptidase D) (CPDW-II) (CP-WII).
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Os05g0268500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine carboxypeptidase II chains A and B (EC 3.4.16.6) (Carboxypeptidase D) (CPDW-II) (CP-WII).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.16 | 0.446 | 5.9 | 0.601 | 0.734 | -1.67 | 0.819 | 3.3 | 0.63 | 3.17 | 19.63 | 4103 | -- | -- |
| 90.41 | 0.443 | 5.96 | 0.0498 | 0.708 | -2.08 | 0.877 | -- | 0.708 | 3.13 | 12.79 | 8377 | -- | -- |
| 92.2 | 0.447 | 5.9 | 0.601 | 0.741 | -1.69 | -- | 3.37 | 0.634 | 3.03 | 19.25 | 4008 | -- | -- |
| 93.04 | 0.449 | 5.98 | 0.0608 | 0.712 | -2.1 | -- | -- | 0.655 | 3.17 | 10.63 | 8378 | -- | -- |
| 102.72 | 0.475 | 6.02 | -0.447 | -- | -1.98 | -- | 1.17 | 0.419 | -- | 19.25 | 4008 | -- | -- |
| 162.79 | 0.598 | 6.11 | -1.04 | 0.616 | -- | 0.921 | -- | 0.0414 | 3.52 | -- | -- | -- | -- |
| 165.41 | 0.602 | 6.11 | -1.05 | 0.62 | -- | -- | -- | 0.0361 | 3.47 | -- | -- | -- | -- |
| 100.65 | 0.469 | 6.04 | -0.58 | -- | -2.44 | -- | -- | 0.378 | -- | 11 | 6174 | -- | -- |
| 93.08 | 0.449 | 5.98 | -- | 0.714 | -2.07 | -- | -- | 0.637 | 3.24 | 10.61 | 8379 | -- | -- |
| 186.96 | 0.639 | 6.11 | -1.02 | -- | -- | -- | -- | 0.0526 | -- | -- | -- | -- | -- |
| 194.52 | 0.652 | 6.09 | -- | 0.599 | -- | -- | -- | 0.153 | 3.47 | -- | -- | -- | -- |
| 109.01 | 0.488 | 6.02 | -- | -- | -2.63 | -- | -- | 0.463 | -- | 8.806 | 6167 | -- | -- |
| 214.66 | 0.684 | 6.09 | -- | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 2 | 84.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 4 | 84.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 35 | 87.85 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 55 | 88.76 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 58 | 88.82 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 70 | 88.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 77 | 89.08 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 117 | 89.49 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 142 | 89.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 144 | 89.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 150 | 89.69 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 159 | 89.73 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 162 | 89.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 16 |
| 169 | 89.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 191 | 89.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 248 | 89.97 | temperature | 20 | 4320 | > th | dose dependent | sin | 2 | NA |
| 256 | 89.99 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 281 | 90.05 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 283 | 90.05 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 9 |
| 344 | 90.18 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 363 | 90.20 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 364 | 90.21 | wind | 3 | 43200 | > th | dose dependent | sin | 2 | NA |
| 373 | 90.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 405 | 90.27 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 410 | 90.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 411 | 90.27 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 423 | 90.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 560 | 90.50 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 580 | 90.55 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 586 | 90.56 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 596 | 90.57 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 599 | 90.58 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 619 | 90.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 10 |
| 630 | 90.65 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 635 | 90.65 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 673 | 90.71 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 12 |
| 758 | 90.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 759 | 90.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 19 |
| 779 | 90.89 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 20 |
| 781 | 90.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 798 | 90.91 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 19 |
| 805 | 90.91 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 22 |
| 852 | 90.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 981 | 91.04 | temperature | 10 | 4320 | > th | dose dependent | rect. | 13 | 22 |